RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA966993" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA966993 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17520422 17520422 PRJNA966993_P_NODE_67314_length_274_cov_1.532338_g66862_i0 PRJNA966993 67314 274 1.532338 4.19860612 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 108 5.3e-19   NTclustered gi|294932372|ref|XM_002780194.1| 423536 g66862 i0 89.535 0.313868613138686 86 8 31 1 174 259 151 67 Perkinsus marinus ATCC 50983 40S ribosomal protein S25, putative, mRNA blastn 86 108 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
22619137 22619137 PRJNA966993_P_NODE_28718_length_395_cov_1.913043_g28266_i0 PRJNA966993 28718 395 1.913043 7.55651985 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 195 5.94e-45   NTclustered gi|294953686|ref|XM_002787842.1| 423536 g28266 i0 76.88 2.2379746835443 359 73 90 10 32 385 31 384 Perkinsus marinus ATCC 50983 40S ribosomal protein S6, putative, mRNA blastn 884 195 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;