RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA966993" and tax_phylum = "Nemertea"

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tax_superkingdom 1

tax_phylum 1

  • Nemertea · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA966993 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3492868 3492868 PRJNA966993_P_NODE_43683_length_326_cov_3.968379_g43231_i0 PRJNA966993 43683 326 3.968379 12.93691554 Lineus longissimus 88925 Nemertea other_Eukaryota 148 3.8e-31   NTclustered gi|2724594845|ref|XM_064776436.1| 88925 g43231 i0 82.927 15.0368098159509 164 28 50 0 160 323 160 323 PREDICTED: Lineus longissimus ras-related protein Rab-7a (LOC135490874), transcript variant X2, mRNA blastn 4902 148 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
21344033 21344033 PRJNA966993_P_NODE_14517_length_550_cov_2.962264_g14077_i0 PRJNA966993 14517 550 2.962264 16.292452 Lineus viridis 56195 Nemertea other_Eukaryota 171 1.4299999999999998e-37   NTclustered gi|166952326|gb|EU302557.1| 56195 g14077 i0 77.941 12.8581818181818 272 60 49 0 35 306 18 289 Lineus viridis ribosomal protein rpl37a mRNA, complete cds blastn 7072 171 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus viridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;