RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA966993" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA966993 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4770253 4770253 PRJNA966993_P_NODE_15164_length_537_cov_2.508621_g14722_i0 PRJNA966993 15164 537 2.508621 13.47129477 Asterias rubens 7604 Echinodermata other_Eukaryota 60.2 3.15e-4   NTclustered gi|1834277370|ref|XM_033779243.1| 7604 g14722 i0 88 0.0931098696461825 50 6 9 0 466 515 220 171 PREDICTED: Asterias rubens c-Myc-binding protein-like (LOC117296364), mRNA blastn 50 60.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
16245423 16245423 PRJNA966993_P_NODE_8953_length_700_cov_5.639553_g8537_i0 PRJNA966993 8953 700 5.639553 39.476871 Acanthaster planci 133434 Echinodermata other_Eukaryota 401 6.029999999999999e-107   NTclustered gi|1229182411|ref|XM_022249129.1| 133434 g8537 i0 82.43 86.2714285714286 461 79 66 2 220 679 526 67 PREDICTED: Acanthaster planci ubiquitin-40S ribosomal protein S27a (LOC110986865), mRNA blastn 60390 401 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
22619418 22619418 PRJNA966993_P_NODE_58638_length_287_cov_1.023364_g58186_i0 PRJNA966993 58638 287 1.023364 2.93705468 Anneissia japonica 1529436 Echinodermata other_Eukaryota 60.2 1.59e-4   NTclustered gi|1826665392|ref|XM_033264360.1| 1529436 g58186 i0 97.143 0.240418118466899 35 1 12 0 49 83 1756 1722 PREDICTED: Anneissia japonica ependymin-related protein 2-like (LOC117119535), mRNA blastn 69 60.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
25168056 25168056 PRJNA966993_P_NODE_14920_length_542_cov_1.916844_g14478_i0 PRJNA966993 14920 542 1.916844 10.38929448 Diadema antillarum 105358 Echinodermata other_Eukaryota 333 1.7e-86   NTclustered gi|2919435354|ref|XM_071637819.1| 105358 g14478 i0 79.956 55.3025830258303 454 89 84 2 1 453 34 486 PREDICTED: Diadema antillarum ubiquitin-ribosomal protein eS31 fusion protein (LOC139726824), mRNA blastn 29974 333 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;