RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA966993" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA966993 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3492968 3492968 PRJNA966993_P_NODE_54723_length_293_cov_1.318182_g54271_i0 PRJNA966993 54723 293 1.318182 3.86227326 Phototrophicaceae bacterium 3069543 Bacteria Bacteria 248 3.23e-61   NTclustered gi|2893358398|emb|OZ220689.1| 3069543 g54271 i0 82.867 392.962457337884 286 40 95 7 12 289 1113794 1113510 MAG: Phototrophicaceae bacterium isolate ee48527d-5dc2-4181-aca3-e21b74048da2 genome assembly, chromosome: 1 blastn 115138 248 1 Bacteria   Bacillati Chloroflexota Candidatus Thermofontia Phototrophicales Phototrophicaceae   Phototrophicaceae bacterium
12421412 12421412 PRJNA966993_P_NODE_59370_length_286_cov_1.061033_g58918_i0 PRJNA966993 59370 286 1.061033 3.03455438 Phototrophicaceae bacterium 3069543 Bacteria Bacteria 300 8.55e-77   NTclustered gi|2893356046|emb|OZ220469.1| 3069543 g58918 i0 87.843 346.608391608392 255 31 89 0 1 255 2201959 2202213 MAG: Phototrophicaceae bacterium isolate 149760b3-584d-4ebc-81cd-1236e649b30c genome assembly, chromosome: 1 blastn 99130 300 1 Bacteria   Bacillati Chloroflexota Candidatus Thermofontia Phototrophicales Phototrophicaceae   Phototrophicaceae bacterium
25492182 25492182 PRJNA966993_P_NODE_83820_length_250_cov_1.463277_g83368_i0 PRJNA966993 83820 250 1.463277 3.6581925 Chloroflexota 200795 Bacteria Bacteria 298 2.63e-76   NTclustered gi|2874253788|emb|OY969772.1| 1672391 g83368 i0 91.031 86.176 223 16 88 4 11 231 671119 671339 MAG: uncultured Chloroflexia bacterium isolate MFD02416.bin.2.42 genome assembly, chromosome: 1 blastn 21544 298 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;