RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA964500" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA964500 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16244695 16244695 PRJNA964500_S_NODE_4893_length_250_cov_3.506787_g4801_i0 PRJNA964500 4893 250 3.506787 8.7669675 Bathymargarites symplector 54994 Mollusca Mollusca 63.9 1.05e-5   NTclustered gi|292668187|gb|GQ160653.1| 54994 g4801 i0 100 0.4 34 0 14 0 213 246 1866 1833 Bathymargarites symplector voucher MCZ:DNA101220 28S ribosomal RNA gene, partial sequence blastn 100 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Seguenziida Seguenziidae Bathymargarites Bathymargarites symplector
16244706 16244706 PRJNA964500_S_NODE_6533_length_222_cov_7.077720_g6441_i0 PRJNA964500 6533 222 7.07772 15.7125384 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.02   NTclustered gi|2912995509|dbj|AP039600.1| 145626 g6441 i0 100 0.126126126126126 28 0 13 0 66 93 24948674 24948701 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 19, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;