RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA964500" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA964500 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9869954 9869954 PRJNA964500_S_NODE_11248_length_178_cov_11.610738_g11156_i0 PRJNA964500 11248 178 11.610738 20.66711364 Orthopoxvirus monkeypox 3431483 Viruses Viruses 58.4 3.24e-4   NTclustered gi|2797671158|gb|PQ281491.1| 10244 g11156 i0 100 2.15168539325843 31 0 17 0 1 31 197069 197039 Monkeypox virus isolate Monkeypox virus/Human/Thailand/DDCBIDI-002/2024, partial genome blastn 383 58.4 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
12420898 12420898 PRJNA964500_S_NODE_15130_length_159_cov_2.700000_g15038_i0 PRJNA964500 15130 159 2.7 4.293 Orthopoxvirus monkeypox 3431483 Viruses Viruses 54.7 0.004   NTclustered gi|2309594316|gb|OP536747.1| 10244 g15038 i0 100 18.2389937106918 29 0 18 0 68 96 119302 119274 Monkeypox virus isolate 9000365, partial genome blastn 2900 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
13695485 13695485 PRJNA964500_S_NODE_3391_length_287_cov_4.728682_g3299_i0 PRJNA964500 3391 287 4.728682 13.57131734 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.027   NTclustered gi|9964314|ref|NC_002520.1| 28321 g3299 i0 94.286 0.121951219512195 35 1 12 1 89 122 153475 153509 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;