RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA951810" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA951810 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6039587 6039587 PRJNA951810_P_NODE_166665_length_245_cov_1.790698_g166320_i0 PRJNA951810 166665 245 1.790698 4.3872101 Kickxella alabastrina 61397 Fungi Fungi 128 3.57e-25   NTclustered gi|2323999502|ref|XM_051534073.1| 61397 g166320 i0 76.25 1.39183673469388 240 57 98 0 1 240 180 419 Kickxella alabastrina putative RPL43B-60S large subunit ribosomal protein (BX661DRAFT_175458), mRNA blastn 341 128 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
16240130 16240130 PRJNA951810_P_NODE_38533_length_314_cov_3.668050_g38190_i0 PRJNA951810 38533 314 3.66805 11.517677 Linderina pennispora 61395 Fungi Fungi 86.1 2.9e-12   NTclustered gi|2028312040|ref|XM_040889415.1| 61395 g38190 i0 97.959 0.156050955414013 49 1 16 0 230 278 189 141 Linderina pennispora 60S ribosomal protein L16 (DL89DRAFT_277101), partial mRNA blastn 49 86.1 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
18787864 18787864 PRJNA951810_P_NODE_145695_length_261_cov_4.744681_g145350_i0 PRJNA951810 145695 261 4.744681 12.38361741 Kickxella alabastrina 61397 Fungi Fungi 145 3.8199999999999995e-30   NTclustered gi|2324017582|ref|XM_051536540.1| 61397 g145350 i0 87.5 51.9233716475096 128 13 49 1 67 194 579 455 Kickxella alabastrina 40S ribosomal protein S18 (BX661DRAFT_184548), mRNA blastn 13552 145 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;