RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA951810" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA951810 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12414668 12414668 PRJNA951810_P_NODE_114710_length_283_cov_7.419048_g114366_i0 PRJNA951810 114710 283 7.419048 20.99590584 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 100 9.2e-17   NTclustered gi|2874254010|emb|OY970335.1| 3107663 g114366 i0 87.356 13.3639575971731 87 11 31 0 189 275 475625 475711 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD10064.bin.c.2 genome assembly, chromosome: 1 blastn 3782 100 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
16239611 16239611 PRJNA951810_P_NODE_190733_length_214_cov_7.000000_g190388_i0 PRJNA951810 190733 214 7 14.98 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 180 8.29e-41   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g190388 i0 84.53 7.0981308411215 181 28 85 0 29 209 7774590 7774410 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 1519 180 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
17514029 17514029 PRJNA951810_P_NODE_137274_length_267_cov_12.381443_g136929_i0 PRJNA951810 137274 267 12.381443 33.05845281 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 211 3.81e-50   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g136929 i0 81.25 50.4157303370786 272 41 100 8 1 267 5031729 5031463 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 13461 211 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
18789226 18789226 PRJNA951810_P_NODE_42775_length_310_cov_8.831224_g42432_i0 PRJNA951810 42775 310 8.831224 27.3767944 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 111 4.71e-20   NTclustered gi|2874253878|emb|OY969933.1| 3107663 g42432 i0 81.752 1.45806451612903 137 21 44 3 1 135 1711252 1711118 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD05502.bin.c.2 genome assembly, chromosome: 1 blastn 452 111 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;