contig_metadata
17 rows where analysis = "blastn", bioproject = "PRJNA951810" and tax_phylum = "Thermodesulfobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 936346 | 936346 | PRJNA951810_P_NODE_162941_length_247_cov_12.051724_g162596_i0 | PRJNA951810 | 162941 | 247 | 12.051724 | 29.76775828 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 154 | 5.95e-33 | NTclustered | gi|2893358418|emb|OZ220710.1| | 2202153 | g162596 | i0 | 80.769 | 2.61133603238866 | 208 | 30 | 82 | 9 | 8 | 210 | 3440437 | 3440639 | MAG: Thermodesulfobacteriota bacterium isolate dce1034a-8f23-488c-aa07-39e6c80a0035 genome assembly, chromosome: 1 | blastn | 645 | 154 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 937393 | 937393 | PRJNA951810_P_NODE_44241_length_310_cov_7.742616_g43898_i0 | PRJNA951810 | 44241 | 310 | 7.742616 | 24.0021096 | Desulfomicrobium sp. ZS1 | 2952228 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2269306666|gb|CP100351.1| | 2952228 | g43898 | i0 | 94.444 | 0.703225806451613 | 36 | 2 | 12 | 0 | 228 | 263 | 1295476 | 1295511 | Desulfomicrobium sp. ZS1 chromosome, complete genome | blastn | 218 | 56.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfomicrobiaceae | Desulfomicrobium | Desulfomicrobium sp. ZS1 | ||
| 1263354 | 1263354 | PRJNA951810_P_NODE_17881_length_466_cov_3.539440_g17546_i0 | PRJNA951810 | 17881 | 466 | 3.53944 | 16.4937904 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 80.5 | 2.08e-10 | NTclustered | gi|2108238081|gb|CP070694.1| | 2044940 | g17546 | i0 | 85.714 | 190.109442060086 | 77 | 9 | 32 | 1 | 85 | 159 | 4817908 | 4817984 | MAG: Desulfobacterales bacterium isolate bin60 chromosome | blastn | 88591 | 80.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium | ||||
| 3814917 | 3814917 | PRJNA951810_P_NODE_101383_length_292_cov_3.543379_g101039_i0 | PRJNA951810 | 101383 | 292 | 3.543379 | 10.34666668 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 141 | 5.61e-29 | NTclustered | gi|2893358420|emb|OZ220712.1| | 2202153 | g101039 | i0 | 90.566 | 29.1301369863014 | 106 | 10 | 36 | 0 | 185 | 290 | 2138041 | 2138146 | MAG: Thermodesulfobacteriota bacterium isolate 564989d4-0a31-48dd-8468-51938819ad86 genome assembly, chromosome: 1 | blastn | 8506 | 141 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 10192718 | 10192718 | PRJNA951810_P_NODE_54288_length_310_cov_4.561181_g53945_i0 | PRJNA951810 | 54288 | 310 | 4.561181 | 14.1396611 | Geomonas | 2651583 | Bacteria | Bacteria | 147 | 1.29e-30 | NTclustered | gi|2893358420|emb|OZ220712.1| | 2202153 | g53945 | i0 | 85.612 | 36.3709677419355 | 139 | 20 | 45 | 0 | 8 | 146 | 4286937 | 4286799 | MAG: Thermodesulfobacteriota bacterium isolate 564989d4-0a31-48dd-8468-51938819ad86 genome assembly, chromosome: 1 | blastn | 11275 | 148 | 0.993243243243243 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 11139112 | 11139112 | PRJNA951810_P_NODE_107449_length_288_cov_5.530233_g107105_i0 | PRJNA951810 | 107449 | 288 | 5.530233 | 15.92707104 | uncultured Mailhella sp. | 1981031 | Bacteria | Bacteria | 172 | 1.96e-38 | NTclustered | gi|2729058701|emb|OZ007001.1| | 1981031 | g107105 | i0 | 85.455 | 41.1979166666667 | 165 | 24 | 57 | 0 | 15 | 179 | 1868583 | 1868747 | MAG: uncultured Mailhella sp. isolate metabat2_pooled_hifiasm.920 MAG genome assembly, chromosome: 1 | blastn | 11865 | 172 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Mailhella | uncultured Mailhella sp. | ||
| 16565841 | 16565841 | PRJNA951810_P_NODE_15813_length_489_cov_0.983173_g15480_i0 | PRJNA951810 | 15813 | 489 | 0.983173 | 4.80771597 | Desulfurivibrio | 427922 | Bacteria | Bacteria | 302 | 4.29e-77 | NTclustered | gi|470485970|ref|NR_076727.1| | 427923 | g15480 | i0 | 78.427 | 115.359918200409 | 496 | 83 | 100 | 18 | 1 | 489 | 742 | 264 | Desulfurivibrio alkaliphilus strain AHT 2 23S ribosomal RNA gene, complete sequence | blastn | 56411 | 302 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfurivibrio | Desulfurivibrio alkaliphilus | ||
| 17515253 | 17515253 | PRJNA951810_P_NODE_29314_length_371_cov_1.271812_g28972_i0 | PRJNA951810 | 29314 | 371 | 1.271812 | 4.71842252 | Pelobacter propionicus | 29543 | Bacteria | Bacteria | 54.7 | 0.01 | NTclustered | gi|118501159|gb|CP000482.1| | 338966 | g28972 | i0 | 92.308 | 0.105121293800539 | 39 | 2 | 10 | 1 | 20 | 57 | 3443467 | 3443505 | Pelobacter propionicus DSM 2379, complete genome | blastn | 39 | 54.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Pelobacter | Pelobacter propionicus | ||
| 18788357 | 18788357 | PRJNA951810_P_NODE_174055_length_238_cov_8.115152_g173710_i0 | PRJNA951810 | 174055 | 238 | 8.115152 | 19.31406176 | Geoalkalibacter subterraneus | 483547 | Bacteria | Bacteria | 65.8 | 2.75e-6 | NTclustered | gi|749207097|gb|CP010311.1| | 483547 | g173710 | i0 | 90 | 1.85714285714286 | 50 | 5 | 21 | 0 | 151 | 200 | 2798827 | 2798778 | Geoalkalibacter subterraneus strain Red1, complete genome | blastn | 442 | 65.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Geoalkalibacteraceae | Geoalkalibacter | Geoalkalibacter subterraneus | ||
| 18789976 | 18789976 | PRJNA951810_P_NODE_89455_length_297_cov_8.870536_g89111_i0 | PRJNA951810 | 89455 | 297 | 8.870536 | 26.34549192 | Geobacter sulfurreducens | 35554 | Bacteria | Bacteria | 99 | 3.49e-16 | NTclustered | gi|1373812086|dbj|AP017912.1| | 35554 | g89111 | i0 | 96.61 | 18.9023569023569 | 59 | 2 | 20 | 0 | 181 | 239 | 2797432 | 2797490 | Geobacter sulfurreducens DNA, complete genome | blastn | 5614 | 99 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sulfurreducens | ||
| 18790000 | 18790000 | PRJNA951810_P_NODE_90755_length_297_cov_3.794643_g90411_i0 | PRJNA951810 | 90755 | 297 | 3.794643 | 11.27008971 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 198 | 3.3499999999999997e-46 | NTclustered | gi|2893358420|emb|OZ220712.1| | 2202153 | g90411 | i0 | 80.147 | 105.585858585859 | 272 | 48 | 91 | 4 | 28 | 296 | 2270965 | 2271233 | MAG: Thermodesulfobacteriota bacterium isolate 564989d4-0a31-48dd-8468-51938819ad86 genome assembly, chromosome: 1 | blastn | 31359 | 198 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 20064475 | 20064475 | PRJNA951810_P_NODE_64876_length_310_cov_2.860759_g64533_i0 | PRJNA951810 | 64876 | 310 | 2.860759 | 8.8683529 | Desulfoglaeba alkanexedens | 361111 | Bacteria | Bacteria | 91.6 | 6.14e-14 | NTclustered | gi|1649181537|gb|CP040098.1| | 980445 | g64533 | i0 | 79.699 | 0.429032258064516 | 133 | 21 | 42 | 4 | 1 | 130 | 1418395 | 1418524 | Desulfoglaeba alkanexedens ALDC chromosome, complete genome | blastn | 133 | 91.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophobacteria | Syntrophobacterales | Syntrophobacteraceae | Desulfoglaeba | Desulfoglaeba alkanexedens | ||
| 20389439 | 20389439 | PRJNA951810_P_NODE_137096_length_268_cov_1.800000_g136751_i0 | PRJNA951810 | 137096 | 268 | 1.8 | 4.824 | Thermodesulfobacteriota | 200940 | Bacteria | Bacteria | 496 | 9.429999999999999e-136 | NTclustered | gi|1208596715|gb|MF361871.1| | 885 | g136751 | i0 | 100 | 105.608208955224 | 268 | 0 | 100 | 0 | 1 | 268 | 20 | 287 | Desulfovibrio sp. strain T2.22MG-35 16S ribosomal RNA gene, partial sequence | blastn | 28303 | 496 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio sp. | ||
| 21337780 | 21337780 | PRJNA951810_P_NODE_12177_length_545_cov_4.904661_g11852_i0 | PRJNA951810 | 12177 | 545 | 4.904661 | 26.73040245 | Pelobacter propionicus | 29543 | Bacteria | Bacteria | 215 | 6.46e-51 | NTclustered | gi|118501159|gb|CP000482.1| | 338966 | g11852 | i0 | 77.368 | 3.36697247706422 | 380 | 74 | 69 | 7 | 170 | 543 | 2564081 | 2564454 | Pelobacter propionicus DSM 2379, complete genome | blastn | 1835 | 215 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Pelobacter | Pelobacter propionicus | ||
| 21340265 | 21340265 | PRJNA951810_P_NODE_88537_length_298_cov_3.195556_g88193_i0 | PRJNA951810 | 88537 | 298 | 3.195556 | 9.52275688 | uncultured Desulfobacter sp. | 240139 | Bacteria | Bacteria | 134 | 9.61e-27 | NTclustered | gi|2621703974|emb|OY762929.1| | 240139 | g88193 | i0 | 81.818 | 12.0536912751678 | 165 | 24 | 55 | 6 | 130 | 292 | 4266162 | 4266002 | MAG: uncultured Desulfobacter sp. isolate ab583996-6c72-41ec-a8bc-7a43732d896d genome assembly, chromosome: 1 | blastn | 3592 | 134 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacter | uncultured Desulfobacter sp. | ||
| 23889279 | 23889279 | PRJNA951810_P_NODE_193119_length_208_cov_11.696296_g192774_i0 | PRJNA951810 | 193119 | 208 | 11.696296 | 24.32829568 | Desulfobulbus oralis | 1986146 | Bacteria | Bacteria | 193 | 1.03e-44 | NTclustered | gi|1343450889|gb|CP021255.1| | 1986146 | g192774 | i0 | 84.158 | 1.97115384615385 | 202 | 28 | 96 | 4 | 2 | 201 | 1421413 | 1421612 | Desulfobulbus oralis strain HOT041/ORNL chromosome, complete genome | blastn | 410 | 193 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfobulbus | Desulfobulbus oralis | ||
| 25161718 | 25161718 | PRJNA951810_P_NODE_117040_length_282_cov_2.760766_g116696_i0 | PRJNA951810 | 117040 | 282 | 2.760766 | 7.78536012 | Desulfobulbus oralis | 1986146 | Bacteria | Bacteria | 510 | 3.57e-140 | NTclustered | gi|1343450889|gb|CP021255.1| | 1986146 | g116696 | i0 | 99.291 | 55.6950354609929 | 282 | 2 | 100 | 0 | 1 | 282 | 904493 | 904774 | Desulfobulbus oralis strain HOT041/ORNL chromosome, complete genome | blastn | 15706 | 510 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfobulbus | Desulfobulbus oralis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;