RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA951810" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA951810 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7315764 7315764 PRJNA951810_P_NODE_64886_length_310_cov_2.860759_g64543_i0 PRJNA951810 64886 310 2.860759 8.8683529 Candidatus Minusculum obligatum 1948790 Bacteria Bacteria 52.8 0.029   NTclustered gi|2862534883|gb|CP174360.1| 1948790 g64543 i0 100 0.0903225806451613 28 0 9 0 161 188 136361 136388 MAG: Patescibacteria group bacterium UBA2103 chromosome, complete genome blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Candidatus Phycocordibacterales Candidatus Phycocordibacteraceae Candidatus Minusculum Candidatus Minusculum obligatum
12416103 12416103 PRJNA951810_P_NODE_24810_length_403_cov_7.893939_g24469_i0 PRJNA951810 24810 403 7.893939 31.81257417 Minisyncoccota bacterium 2053589 Bacteria Bacteria 58.4 8.31e-4   NTclustered gi|2556887672|gb|CP129474.1| 2053589 g24469 i0 97.059 0.312655086848635 34 1 8 0 46 79 367289 367256 MAG: Candidatus Paceibacterota bacterium isolate cMAG.22 chromosome, complete genome blastn 126 58.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
20063011 20063011 PRJNA951810_P_NODE_15996_length_486_cov_12.549637_g15663_i0 PRJNA951810 15996 486 12.549637 60.99123582 Minisyncoccota bacterium 2053589 Bacteria Bacteria 60.2 2.83e-4   NTclustered gi|2556887672|gb|CP129474.1| 2053589 g15663 i0 97.143 0.0720164609053498 35 1 7 0 104 138 347577 347611 MAG: Candidatus Paceibacterota bacterium isolate cMAG.22 chromosome, complete genome blastn 35 60.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;