RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA951810" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA951810 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
936710 936710 PRJNA951810_P_NODE_185561_length_225_cov_4.861842_g185216_i0 PRJNA951810 185561 225 4.861842 10.9391445 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 361 2.9299999999999993e-95   NTclustered gi|290978665|ref|XM_002672010.1| 5762 g185216 i0 96.347 3.97333333333333 219 8 97 0 7 225 82 300 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82759), mRNA blastn 894 361 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
2211384 2211384 PRJNA951810_P_NODE_144842_length_262_cov_2.677249_g144497_i0 PRJNA951810 144842 262 2.677249 7.01439238 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 440 4.369999999999998e-119   NTclustered gi|290987322|ref|XM_002676326.1| 5762 g144497 i0 96.947 1 262 8 100 0 1 262 102 363 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_36914), mRNA blastn 262 440 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9864232 9864232 PRJNA951810_P_NODE_153108_length_255_cov_5.692308_g152763_i0 PRJNA951810 153108 255 5.692308 14.5153854 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 407 4.29e-109   NTclustered gi|290993020|ref|XM_002679086.1| 5762 g152763 i0 95.669 3.38823529411765 254 10 99 1 1 253 473 726 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_79189), mRNA blastn 864 407 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20062705 20062705 PRJNA951810_P_NODE_141716_length_264_cov_5.193717_g141371_i0 PRJNA951810 141716 264 5.193717 13.71141288 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 364 2.729999999999999e-96   NTclustered gi|290976150|ref|XM_002670758.1| 5762 g141371 i0 92.52 4.96969696969697 254 19 96 0 1 254 1192 1445 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_81712), partial mRNA blastn 1312 364 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20064971 20064971 PRJNA951810_P_NODE_96216_length_295_cov_2.198198_g95872_i0 PRJNA951810 96216 295 2.198198 6.4846841 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 396 1.0999999999999994e-105   NTclustered gi|2031940963|emb|OD957789.1| 5763 g95872 i0 90.847 2.09491525423729 295 27 100 0 1 295 182 476 Naegleria fowleri Karachi_NF001 strain blastn 618 396 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
23888448 23888448 PRJNA951810_P_NODE_143319_length_263_cov_3.452632_g142974_i0 PRJNA951810 143319 263 3.452632 9.08042216 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 169 2.28e-37   NTclustered gi|290991132|ref|XM_002678144.1| 5762 g142974 i0 78.327 1.47908745247148 263 55 99 2 1 262 278 17 Naegleria gruberi ribosomal protein L3 (NAEGRDRAFT_79448), mRNA blastn 389 169 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
25164307 25164307 PRJNA951810_P_NODE_88180_length_298_cov_3.537778_g87836_i0 PRJNA951810 88180 298 3.537778 10.54257844 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 444 3.91e-120   NTclustered gi|290979181|ref|XM_002672267.1| 5762 g87836 i0 93.709 4.02013422818792 302 10 98 1 6 298 548 247 Naegleria gruberi 40S ribosomal protein (NAEGRDRAFT_56310), mRNA blastn 1198 444 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;