contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA951810" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2212944 | 2212944 | PRJNA951810_P_NODE_60542_length_310_cov_3.485232_g60199_i0 | PRJNA951810 | 60542 | 310 | 3.485232 | 10.8042192 | uncultured Gemmatimonadaceae bacterium | 246130 | Bacteria | Bacteria | 135 | 2.8e-27 | NTclustered | gi|2874253995|emb|OY970320.1| | 246130 | g60199 | i0 | 83.221 | 0.480645161290323 | 149 | 23 | 48 | 2 | 1 | 148 | 1797874 | 1797727 | MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 | blastn | 149 | 135 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | uncultured Gemmatimonadaceae bacterium | ||
| 4765192 | 4765192 | PRJNA951810_P_NODE_192104_length_211_cov_5.934783_g191759_i0 | PRJNA951810 | 192104 | 211 | 5.934783 | 12.52239213 | Gemmatimonas phototrophica | 1379270 | Bacteria | Bacteria | 285 | 1.68e-72 | NTclustered | gi|1015602748|gb|CP011454.1| | 1379270 | g191759 | i0 | 91.08 | 653.388625592417 | 213 | 16 | 100 | 3 | 1 | 211 | 2076560 | 2076349 | Gemmatimonas phototrophica strain AP64, complete genome | blastn | 137865 | 285 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas phototrophica | |
| 7313945 | 7313945 | PRJNA951810_P_NODE_135266_length_269_cov_3.668367_g134921_i0 | PRJNA951810 | 135266 | 269 | 3.668367 | 9.86790723 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 224 | 4.929999999999999e-54 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g134921 | i0 | 86.256 | 28.1412639405204 | 211 | 23 | 77 | 5 | 62 | 269 | 1897651 | 1897444 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 7570 | 224 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 7314493 | 7314493 | PRJNA951810_P_NODE_169166_length_243_cov_2.052941_g168821_i0 | PRJNA951810 | 169166 | 243 | 2.052941 | 4.98864663 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 115 | 2.7500000000000003e-21 | NTclustered | gi|575462059|gb|CP007130.1| | 861299 | g168821 | i0 | 84.746 | 2.52263374485597 | 118 | 14 | 48 | 4 | 25 | 140 | 66503 | 66618 | Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence | blastn | 613 | 115 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 7315446 | 7315446 | PRJNA951810_P_NODE_43966_length_310_cov_7.907173_g43623_i0 | PRJNA951810 | 43966 | 310 | 7.907173 | 24.5122363 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 135 | 2.8e-27 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g43623 | i0 | 87.288 | 18.3258064516129 | 118 | 15 | 38 | 0 | 31 | 148 | 4200876 | 4200759 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 5681 | 135 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 8589369 | 8589369 | PRJNA951810_P_NODE_162787_length_248_cov_0.880000_g162442_i0 | PRJNA951810 | 162787 | 248 | 0.88 | 2.1824 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 122 | 1.69e-23 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g162442 | i0 | 84.553 | 0.495967741935484 | 123 | 19 | 50 | 0 | 33 | 155 | 4156115 | 4156237 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 123 | 122 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 9863711 | 9863711 | PRJNA951810_P_NODE_123248_length_278_cov_1.385366_g122903_i0 | PRJNA951810 | 123248 | 278 | 1.385366 | 3.85131748 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 385 | 2.22e-102 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g122903 | i0 | 91.786 | 81.6690647482014 | 280 | 17 | 100 | 6 | 1 | 278 | 3042928 | 3042653 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 22704 | 385 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 9864396 | 9864396 | PRJNA951810_P_NODE_163688_length_247_cov_3.241379_g163343_i0 | PRJNA951810 | 163688 | 247 | 3.241379 | 8.00620613 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 383 | 6.97e-102 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g163343 | i0 | 96.154 | 433.777327935223 | 234 | 9 | 95 | 0 | 3 | 236 | 3043199 | 3042966 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 107143 | 383 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 12415218 | 12415218 | PRJNA951810_P_NODE_149130_length_258_cov_9.075676_g148785_i0 | PRJNA951810 | 149130 | 258 | 9.075676 | 23.41524408 | uncultured Gemmatimonadaceae bacterium | 246130 | Bacteria | Bacteria | 195 | 3.69e-45 | NTclustered | gi|2874253995|emb|OY970320.1| | 246130 | g148785 | i0 | 84.236 | 12.7325581395349 | 203 | 28 | 78 | 4 | 58 | 258 | 323193 | 322993 | MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 | blastn | 3285 | 195 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | uncultured Gemmatimonadaceae bacterium | ||
| 18787670 | 18787670 | PRJNA951810_P_NODE_133475_length_270_cov_6.385787_g133130_i0 | PRJNA951810 | 133475 | 270 | 6.385787 | 17.2416249 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 110 | 1.45e-19 | NTclustered | gi|2107901501|gb|CP070815.1| | 2026742 | g133130 | i0 | 90.588 | 29.6962962962963 | 85 | 4 | 30 | 4 | 8 | 88 | 1390522 | 1390438 | MAG: Gemmatimonadetes bacterium isolate bin118 chromosome | blastn | 8018 | 110 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 18789101 | 18789101 | PRJNA951810_P_NODE_36435_length_326_cov_2.403162_g36092_i0 | PRJNA951810 | 36435 | 326 | 2.403162 | 7.83430812 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 494 | 4.24e-135 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g36092 | i0 | 94.136 | 49.739263803681 | 324 | 19 | 99 | 0 | 1 | 324 | 3043220 | 3043543 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 16215 | 494 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 21338409 | 21338409 | PRJNA951810_P_NODE_159237_length_250_cov_6.446328_g158892_i0 | PRJNA951810 | 159237 | 250 | 6.446328 | 16.11582 | Pseudogemmatithrix spongiicola | 3062599 | Bacteria | Bacteria | 141 | 4.7e-29 | NTclustered | gi|2557479348|gb|CP130613.1| | 3062599 | g158892 | i0 | 79.71 | 2.148 | 207 | 32 | 81 | 9 | 12 | 213 | 428756 | 428957 | Pseudogemmatithrix spongiicola strain 318 chromosome, complete genome | blastn | 537 | 141 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Pseudogemmatithrix | Pseudogemmatithrix spongiicola | |
| 25164015 | 25164015 | PRJNA951810_P_NODE_70840_length_304_cov_1.285714_g70496_i0 | PRJNA951810 | 70840 | 304 | 1.285714 | 3.90857056 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 440 | 5.169999999999997e-119 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g70496 | i0 | 92.787 | 156.546052631579 | 305 | 21 | 100 | 1 | 1 | 304 | 423120 | 422816 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 47590 | 440 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;