RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA951810" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA951810 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3487518 3487518 PRJNA951810_P_NODE_194343_length_205_cov_10.484848_g193998_i0 PRJNA951810 194343 205 10.484848 21.4939384 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.018   NTclustered gi|2917940756|emb|OZ237571.1| 6108 g193998 i0 96.774 0.151219512195122 31 1 15 0 144 174 3044181 3044211 Anemonia sulcata genome assembly, chromosome: 17 blastn 31 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
12414638 12414638 PRJNA951810_P_NODE_112930_length_285_cov_1.358491_g112586_i0 PRJNA951810 112930 285 1.358491 3.87169935 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 52.8 0.026   NTclustered gi|2518995118|ref|XM_057448792.1| 13093 g112586 i0 100 0.0982456140350877 28 0 10 0 135 162 676 703 PREDICTED: Hydractinia symbiolongicarpus ubiquitin-conjugating enzyme E2 E1-like (LOC130641820), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
25162446 25162446 PRJNA951810_P_NODE_162380_length_248_cov_3.131429_g162035_i0 PRJNA951810 162380 248 3.131429 7.76594392 Nematostella vectensis 45351 Cnidaria other_Eukaryota 176 1.28e-39   NTclustered gi|2257811793|ref|XM_001633797.3| 45351 g162035 i0 80.87 11.1129032258065 230 38 92 6 1 227 168 394 PREDICTED: Nematostella vectensis 40S ribosomal protein S3a (LOC5513560), mRNA blastn 2756 176 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;