RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA951810" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA951810 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11140117 11140117 PRJNA951810_P_NODE_168889_length_243_cov_3.447059_g168544_i0 PRJNA951810 168889 243 3.447059 8.37635337 Candidatus Criblamydia sequanensis 340071 Bacteria Bacteria 228 3.389999999999999e-55   NTclustered gi|678241437|emb|LK031773.1| 1437425 g168544 i0 83.539 1 243 40 100 0 1 243 31995 31753 Criblamydia sequanensis plasmid 1, strain CRIB-18, complete sequence blastn 243 228 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Criblamydiaceae Candidatus Criblamydia Candidatus Criblamydia sequanensis
18787737 18787737 PRJNA951810_P_NODE_138015_length_267_cov_3.355670_g137670_i0 PRJNA951810 138015 267 3.35567 8.9596389 Candidatus Neptunichlamydia sp. REUL1 3064277 Bacteria Bacteria 147 1.09e-30   NTclustered gi|2578658231|emb|OY735137.1| 3064277 g137670 i0 94.737 27.6666666666667 95 3 36 2 15 109 912582 912674 Candidatus Neptunochlamydia sp. REUL1 isolate 46185 genome assembly, chromosome: 4 blastn 7387 147 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Candidatus Neptunichlamydia Candidatus Neptunichlamydia sp. REUL1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;