RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA951810" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA951810 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12417237 12417237 PRJNA951810_P_NODE_87690_length_298_cov_4.031111_g87346_i0 PRJNA951810 87690 298 4.031111 12.01271078 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 78.7 4.57e-10   NTclustered gi|2621705098|emb|OY763324.1| 2026781 g87346 i0 87.143 91.255033557047 70 7 23 2 57 125 2334320 2334388 MAG: Candidatus Poribacteria bacterium isolate 3d2a48e4-3859-4b6e-83ef-b4ffa18775ef genome assembly, chromosome: 1 blastn 27194 78.7 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
25164423 25164423 PRJNA951810_P_NODE_95540_length_295_cov_4.216216_g95196_i0 PRJNA951810 95540 295 4.216216 12.4378372 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 80.5 1.26e-10   NTclustered gi|2621703383|emb|OY762492.1| 2026781 g95196 i0 90.164 1.52881355932203 61 6 21 0 60 120 2497080 2497020 MAG: Candidatus Poribacteria bacterium isolate 99769213-57d3-4dda-a27c-563ac69bc0fb genome assembly, chromosome: 1 blastn 451 80.5 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;