RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA951810" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA951810 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2213552 2213552 PRJNA951810_P_NODE_96102_length_295_cov_2.900901_g95758_i0 PRJNA951810 96102 295 2.900901 8.55765795 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 58.4 5.88e-4   NTclustered gi|921122384|ref|XM_013580356.1| 51315 g95758 i0 100 0.447457627118644 31 0 11 0 34 64 793 763 Eimeria necatrix hypothetical protein, conserved partial mRNA blastn 132 58.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
3815123 3815123 PRJNA951810_P_NODE_131903_length_271_cov_8.181818_g131558_i0 PRJNA951810 131903 271 8.181818 22.17272678 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 69.4 2.47e-7   NTclustered gi|921132519|ref|XM_013585341.1| 51315 g131558 i0 95.349 7.16236162361624 43 2 16 0 193 235 3553 3595 Eimeria necatrix hypothetical protein, conserved partial mRNA blastn 1941 69.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
8589149 8589149 PRJNA951810_P_NODE_149187_length_258_cov_7.967568_g148842_i0 PRJNA951810 149187 258 7.967568 20.55632544 Cryptosporidium muris 5808 SAR_Eukaryotes SAR_Eukaryotes 366 7.38e-97   NTclustered gi|209883090|ref|XM_002142934.1| 441375 g148842 i0 92.248 2.01937984496124 258 20 100 0 1 258 677 420 Cryptosporidium muris RN66 uncharacterized protein (CMU_002460), partial mRNA blastn 521 366 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium muris
11466662 11466662 PRJNA951810_P_NODE_100769_length_292_cov_5.689498_g100425_i0 PRJNA951810 100769 292 5.689498 16.61333416 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.008   NTclustered gi|1472921353|ref|XM_026336195.1| 88456 g100425 i0 94.286 0.410958904109589 35 2 12 0 81 115 2762 2796 PREDICTED: Cyclospora cayetanensis uncharacterized LOC34620823 (LOC34620823), mRNA blastn 120 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
12415305 12415305 PRJNA951810_P_NODE_154830_length_254_cov_3.055249_g154485_i0 PRJNA951810 154830 254 3.055249 7.76033246 Cryptosporidium muris 5808 SAR_Eukaryotes SAR_Eukaryotes 390 4.299999999999999e-104   NTclustered gi|209883090|ref|XM_002142934.1| 441375 g154485 i0 95.851 1.95669291338583 241 10 95 0 14 254 1 241 Cryptosporidium muris RN66 uncharacterized protein (CMU_002460), partial mRNA blastn 497 390 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium muris
16565605 16565605 PRJNA951810_P_NODE_126433_length_275_cov_6.698020_g126088_i0 PRJNA951810 126433 275 6.69802 18.419555 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.51e-4   NTclustered gi|820695871|tpe|LN714490.1| 432359 g126088 i0 97.143 12.1927272727273 35 1 13 0 190 224 586392 586358 TPA_asm: Toxoplasma gondii VEG, chromosome chrIb, complete genome blastn 3353 60.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;