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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA951810" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 16 ✖

bioproject 1

  • PRJNA951810 · 16 ✖

analysis 1

  • blastn · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2211501 2211501 PRJNA951810_P_NODE_151582_length_256_cov_10.136612_g151237_i0 PRJNA951810 151582 256 10.136612 25.94972672 Dictyostelium purpureum 5786 Evosea other_Eukaryota 52.8 0.023   NTclustered gi|330804915|ref|XM_003290387.1| 5786 g151237 i0 100 0.109375 28 0 11 0 70 97 189 216 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_81152), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
2211933 2211933 PRJNA951810_P_NODE_180182_length_232_cov_2.402516_g179837_i0 PRJNA951810 180182 232 2.402516 5.57383712 Dictyostelium citrinum 361072 Evosea other_Eukaryota 135 2e-27   NTclustered gi|294662991|ref|NC_007787.2| 361072 g179837 i0 82.209 18.2715517241379 163 23 68 6 31 188 21376 21537 Dictyostelium citrinum mitochondrion, complete genome blastn 4239 135 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium citrinum
2212490 2212490 PRJNA951810_P_NODE_33462_length_344_cov_1.564576_g33120_i0 PRJNA951810 33462 344 1.564576 5.38214144 Platyamoeba placida 3454475 Discosea other_Eukaryota 453 7.630000000000001e-123   NTclustered gi|33946348|gb|AY294153.1| 197527 g33120 i0 90.407 98.3982558139535 344 33 100 0 1 344 758 1101 Platyamoeba placida actin mRNA, partial cds blastn 33849 453 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
4766581 4766581 PRJNA951810_P_NODE_93264_length_296_cov_4.197309_g92920_i0 PRJNA951810 93264 296 4.197309 12.42403464 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 60.2 1.64e-4   NTclustered gi|470484210|ref|XM_004343996.1| 1257118 g92920 i0 91.111 0.152027027027027 45 2 15 2 229 272 446 403 Acanthamoeba castellanii str. Neff Peroxin 13 (Pex13), putative (ACA1_053870), partial mRNA blastn 45 60.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6366947 6366947 PRJNA951810_P_NODE_104525_length_290_cov_3.870968_g104181_i0 PRJNA951810 104525 290 3.870968 11.2258072 Didymium 5792 Evosea other_Eukaryota 462 1.05e-125   NTclustered gi|25989341|gb|AY062881.1| 181200 g104181 i0 95.517 40.9034482758621 290 12 100 1 1 290 628 916 Hyperamoeba dachnaya small subunit ribosomal RNA gene, partial sequence blastn 11862 462 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium dachnayum
7315775 7315775 PRJNA951810_P_NODE_65506_length_310_cov_2.780591_g65163_i0 PRJNA951810 65506 310 2.780591 8.6198321 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 145 4.6399999999999994e-30   NTclustered gi|470531839|ref|XM_004358199.1| 1257118 g65163 i0 84.828 0.670967741935484 145 20 46 2 1 144 435 292 Acanthamoeba castellanii str. Neff thiF family protein (ACA1_085210), partial mRNA blastn 208 145 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9864308 9864308 PRJNA951810_P_NODE_157988_length_251_cov_5.297753_g157643_i0 PRJNA951810 157988 251 5.297753 13.29736003 Cribraria violacea 1334538 Evosea other_Eukaryota 248 2.7e-61   NTclustered gi|501417113|gb|JX481322.1| 1334538 g157643 i0 84.706 88.1075697211155 255 31 100 7 1 251 761 511 Cribraria violacea voucher AMFD172 elongation factor 1A (EF1A) gene, partial cds blastn 22115 248 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Liceales Cribrariaceae Cribraria Cribraria violacea
11139539 11139539 PRJNA951810_P_NODE_134589_length_269_cov_10.183673_g134244_i0 PRJNA951810 134589 269 10.183673 27.39408037 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 228 3.809999999999999e-55   NTclustered gi|470427085|ref|XM_004337911.1| 1257118 g134244 i0 98.45 0.479553903345725 129 2 48 0 128 256 1539 1411 Acanthamoeba castellanii str. Neff 4aminobutyrate aminotransferase (ACA1_321730), partial mRNA blastn 129 228 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11467551 11467551 PRJNA951810_P_NODE_34569_length_337_cov_5.189394_g34226_i0 PRJNA951810 34569 337 5.189394 17.48825778 Ripella 1217112 Discosea other_Eukaryota 520 7.249999999999999e-143   NTclustered gi|1269228350|gb|MF683475.1| 2047821 g34226 i0 94.444 91.7329376854599 342 11 100 6 1 337 182 520 Ripella platypodia clone 23.4.23 18S ribosomal RNA gene, partial sequence blastn 30914 520 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
12743104 12743104 PRJNA951810_P_NODE_35930_length_329_cov_1.484375_g35587_i0 PRJNA951810 35930 329 1.484375 4.88359375 Flamella 490353 Evosea other_Eukaryota 608 1.4599999999999995e-169   NTclustered gi|163943978|gb|EU186022.1| 490515 g35587 i0 100 98.8632218844985 329 0 100 0 1 329 687 1015 Flamella arnhemensis 18S ribosomal RNA gene, partial sequence blastn 32526 608 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella arnhemensis
13689476 13689476 PRJNA951810_P_NODE_129771_length_273_cov_3.675000_g129426_i0 PRJNA951810 129771 273 3.675 10.03275 Dictyostelium purpureum 5786 Evosea other_Eukaryota 148 3.11e-31   NTclustered gi|330805894|ref|XM_003290864.1| 5786 g129426 i0 86.232 1.73626373626374 138 18 50 1 64 200 259 122 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_81609), partial mRNA blastn 474 148 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
16239262 16239262 PRJNA951810_P_NODE_168773_length_243_cov_4.164706_g168428_i0 PRJNA951810 168773 243 4.164706 10.12023558 Didymium environmental sample 1173723 Evosea other_Eukaryota 121 5.92e-23   NTclustered gi|407196931|gb|JX545305.1| 1173723 g168428 i0 77.391 19.0205761316872 230 35 90 11 26 243 1 225 Didymium environmental sample clone HCA_D08-36 28S ribosomal RNA gene, partial sequence blastn 4622 121 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae   Didymium environmental sample
16239265 16239265 PRJNA951810_P_NODE_168993_length_243_cov_2.882353_g168648_i0 PRJNA951810 168993 243 2.882353 7.00411779 Heterostelium album 2086695 Evosea other_Eukaryota 122 1.6499999999999995e-23   NTclustered gi|1160571044|ref|XM_020575016.1| 670386 g168648 i0 81.046 1.16460905349794 153 29 63 0 89 241 435 283 Polysphondylium pallidum PN500 40S ribosomal protein S14 (rps14), partial mRNA blastn 283 122 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
19115634 19115634 PRJNA951810_P_NODE_90535_length_297_cov_4.343750_g90191_i0 PRJNA951810 90535 297 4.34375 12.9009375 Acanthamoeba 5754 Discosea other_Eukaryota 135 2.6600000000000003e-27   NTclustered gi|881634|gb|U29610.1|ACU29610 5755 g90191 i0 78.112 2.96969696969697 233 37 74 6 7 226 836 605 Acanthaoeba castellanii actin-related protein 3 Arp3 mRNA, complete cds blastn 882 135 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20064717 20064717 PRJNA951810_P_NODE_79356_length_299_cov_4.402655_g79012_i0 PRJNA951810 79356 299 4.402655 13.16393845 Acytostelium leptosomum 133408 Evosea other_Eukaryota 449 8.440000000000001e-122   NTclustered gi|1057487862|gb|KX539491.1| 133408 g79012 i0 93.291 104.230769230769 313 7 100 1 1 299 1398 1710 Acytostelium leptosomum strain FG12A dihydrolipoamide acetyltransferase (pdhC) gene, complete cds blastn 31165 449 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium leptosomum
21338739 21338739 PRJNA951810_P_NODE_180737_length_231_cov_4.031646_g180392_i0 PRJNA951810 180737 231 4.031646 9.31310226 Ripella tribonemae 2047823 Discosea other_Eukaryota 390 3.849999999999999e-104   NTclustered gi|1269228471|gb|MF683596.1| 2047823 g180392 i0 96.996 101.155844155844 233 5 100 2 1 231 1549 1317 Ripella tribonemae clone 22.1.14 18S ribosomal RNA gene, partial sequence blastn 23367 390 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella tribonemae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;