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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA951412" and tax_phylum = "Chlorophyta"

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tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA951412 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2210063 2210063 PRJNA951412_P_NODE_2282_length_311_cov_1.882353_g2197_i0 PRJNA951412 2282 311 1.882353 5.85411783 Micromonas commoda 296587 Plants Plants 82.4 3.71e-11   NTclustered gi|255077212|ref|XM_002502208.1| 296587 g2197 i0 78.195 6.97749196141479 133 26 43 2 174 306 1201 1072 Micromonas commoda predicted protein partial mRNA blastn 2170 82.4 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
2210150 2210150 PRJNA951412_P_NODE_882_length_484_cov_4.386861_g797_i0 PRJNA951412 882 484 4.386861 21.23240724 Micromonas commoda 296587 Plants Plants 235 4.36e-57   NTclustered gi|255081109|ref|XM_002504075.1| 296587 g797 i0 82.182 28.6962809917355 275 47 57 2 7 280 1 274 Micromonas commoda predicted protein partial mRNA blastn 13889 235 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
4763130 4763130 PRJNA951412_P_NODE_1044_length_440_cov_2.790191_g959_i0 PRJNA951412 1044 440 2.790191 12.2768404 Monoraphidium neglectum 145388 Plants Plants 65.8 5.46e-6   NTclustered gi|926786903|ref|XM_014046472.1| 145388 g959 i0 93.182 0.1 44 3 10 0 395 438 470 427 Monoraphidium neglectum hypothetical protein mRNA blastn 44 65.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
4763222 4763222 PRJNA951412_P_NODE_8264_length_216_cov_8.713287_g8179_i0 PRJNA951412 8264 216 8.713287 18.82069992 Micromonas commoda 296587 Plants Plants 183 6.48e-42   NTclustered gi|255072468|ref|XM_002499863.1| 296587 g8179 i0 87.117 25.7777777777778 163 19 75 2 51 212 190 29 Micromonas commoda predicted protein mRNA blastn 5568 183 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
6037923 6037923 PRJNA951412_P_NODE_3245_length_273_cov_3.455000_g3160_i0 PRJNA951412 3245 273 3.455 9.43215 Chlamydomonas sp. ICE-L 309537 Plants Plants 176 1.43e-39   NTclustered gi|1433048021|gb|MF780877.1| 309537 g3160 i0 84.971 61.2857142857143 173 26 63 0 101 273 16 188 Chlamydomonas sp. ICE-L heat shock protein 70A (HSP70A) mRNA, partial cds blastn 16731 176 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. ICE-L
6037965 6037965 PRJNA951412_P_NODE_6885_length_245_cov_0.889535_g6800_i0 PRJNA951412 6885 245 0.889535 2.17936075 Mantoniella tinhauana 3097027 Plants Plants 71.3 6.11e-8   NTclustered gi|2735153279|gb|CP140064.1| 3097027 g6800 i0 83.333 0.318367346938775 78 11 31 2 99 175 3034835 3034759 Mantoniella tinhauana isolate LFS chromosome 3 blastn 78 71.3 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Mantoniella Mantoniella tinhauana
8915544 8915544 PRJNA951412_P_NODE_3627_length_262_cov_2.962963_g3542_i0 PRJNA951412 3627 262 2.962963 7.76296306 Chlorophyta 3041 Plants Plants 213 1.04e-50   NTclustered gi|760444702|ref|XM_011401118.1| 3075 g3542 i0 85.644 57.8282442748092 202 29 77 0 61 262 124 325 Auxenochlorella protothecoides 40S ribosomal protein S23-2 partial mRNA blastn 15151 213 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
16237586 16237586 PRJNA951412_P_NODE_1073_length_434_cov_1.282548_g988_i0 PRJNA951412 1073 434 1.282548 5.56625832 Mantoniella tinhauana 3097027 Plants Plants 337 1.0299999999999996e-87   NTclustered gi|2735153278|gb|CP140063.1| 3097027 g988 i0 80.866 85.0092165898618 439 74 100 9 1 434 631892 631459 Mantoniella tinhauana isolate LFS chromosome 2 blastn 36894 337 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Mantoniella Mantoniella tinhauana
16237597 16237597 PRJNA951412_P_NODE_1873_length_335_cov_2.916031_g1788_i0 PRJNA951412 1873 335 2.916031 9.76870385 Chlorella variabilis 554065 Plants Plants 327 4.69e-85   NTclustered gi|552830805|ref|XM_005847928.1| 554065 g1788 i0 84.412 97.9731343283582 340 46 100 5 1 335 678 341 Chlorella variabilis hypothetical protein (RACK1) mRNA, complete cds blastn 32821 327 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
16237633 16237633 PRJNA951412_P_NODE_413_length_751_cov_4.455752_g331_i0 PRJNA951412 413 751 4.455752 33.46269752 Micromonas commoda 296587 Plants Plants 363 3.06e-95   NTclustered gi|255081970|ref|XM_002508158.1| 296587 g331 i0 80.679 60.9840213049268 471 87 62 4 255 723 509 41 Micromonas commoda predicted protein mRNA blastn 45799 363 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
22611802 22611802 PRJNA951412_P_NODE_2818_length_287_cov_4.658879_g2733_i0 PRJNA951412 2818 287 4.658879 13.37098273 Volvox carteri 3067 Plants Plants 76.8 1.57e-9   NTclustered gi|302838673|ref|XM_002950849.1| 3068 g2733 i0 97.727 0.327526132404181 44 1 15 0 222 265 770 727 Volvox carteri f. nagariensis component of cytosolic 80S ribosome and 60S large subunit (rpl8), mRNA blastn 94 76.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
25160905 25160905 PRJNA951412_P_NODE_1700_length_348_cov_1.872727_g1615_i0 PRJNA951412 1700 348 1.872727 6.51708996 Chlamydomonas incerta 51695 Plants Plants 207 6.65e-49   NTclustered gi|74272614|gb|DQ122872.1| 51695 g1615 i0 82.231 5.77011494252874 242 41 69 2 106 346 693 453 Chlamydomonas incerta mitochondrial ADP/ATP translocator (ANT) mRNA, complete cds; nuclear gene for mitochondrial product blastn 2008 207 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;