RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA951388" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA951388 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4763108 4763108 PRJNA951388_S_NODE_4284_length_398_cov_1.938462_g4157_i0 PRJNA951388 4284 398 1.938462 7.71507876 Biomphalaria glabrata 6526 Mollusca Mollusca 139 2.84e-28   NTclustered gi|296785143|gb|AC238540.4| 6526 g4157 i0 83.333 2.87939698492462 168 11 38 10 108 259 30074 29908 Biomphalaria glabrata BAC clone BG_BBa-11B23 from chromosome unknown, complete sequence blastn 1146 139 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
4763113 4763113 PRJNA951388_S_NODE_5424_length_361_cov_144.895833_g5297_i0 PRJNA951388 5424 361 144.895833 523.07395713 Idiosepius paradoxus 294707 Mollusca Mollusca 58.4 7.36e-4   NTclustered gi|325504932|dbj|AB586703.1| 294707 g5297 i0 100 0.642659279778393 31 0 9 0 1 31 8 38 Idiosepius paradoxus cenG mRNA for centaurin gamma homolog, complete cds blastn 232 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda   Idiosepiidae Idiosepius Idiosepius paradoxus
8587727 8587727 PRJNA951388_S_NODE_4307_length_397_cov_3.805556_g4180_i0 PRJNA951388 4307 397 3.805556 15.10805732 Anadara broughtonii 148819 Mollusca Mollusca 54.7 0.011   NTclustered gi|2170965484|dbj|LC593126.1| 148819 g4180 i0 96.875 0.292191435768262 32 1 8 0 1 32 29 60 Anadara broughtonii GnRH mRNA for gonadotropin releasing hormone, complete cds blastn 116 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Arcoida Arcidae Anadara Anadara broughtonii
8587730 8587730 PRJNA951388_S_NODE_5447_length_361_cov_4.527778_g5320_i0 PRJNA951388 5447 361 4.527778 16.34527858 Anadara broughtonii 148819 Mollusca Mollusca 56.5 0.003   NTclustered gi|2170965484|dbj|LC593126.1| 148819 g5320 i0 100 0.329639889196676 30 0 8 0 332 361 58 29 Anadara broughtonii GnRH mRNA for gonadotropin releasing hormone, complete cds blastn 119 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Arcoida Arcidae Anadara Anadara broughtonii
13688406 13688406 PRJNA951388_S_NODE_5291_length_366_cov_1.313993_g5164_i0 PRJNA951388 5291 366 1.313993 4.80921438 Sinonovacula constricta 98310 Mollusca Mollusca 54.7 0.01   NTclustered gi|937961735|gb|KR534869.1| 98310 g5164 i0 100 0.0792349726775956 29 0 8 0 318 346 29 1 Sinonovacula constricta insulin-like peptide 1 mRNA, complete cds blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Cardiida Solecurtidae Sinonovacula Sinonovacula constricta
16237584 16237584 PRJNA951388_S_NODE_9893_length_263_cov_2.384211_g9766_i0 PRJNA951388 9893 263 2.384211 6.27047493 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.007   NTclustered gi|2912981848|dbj|AP039587.1| 145626 g9766 i0 96.875 0.121673003802281 32 1 12 0 230 261 84243617 84243586 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 6, sequence blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
16565285 16565285 PRJNA951388_S_NODE_12453_length_222_cov_5.127517_g12326_i0 PRJNA951388 12453 222 5.127517 11.38308774 root 1 Root_unresolved Root_unresolved 54.7 0.005   NTclustered gi|2170965484|dbj|LC593126.1| 148819 g12326 i0 100 0.513513513513513 29 0 13 0 1 29 29 57 Anadara broughtonii GnRH mRNA for gonadotropin releasing hormone, complete cds blastn 114 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Arcoida Arcidae Anadara Anadara broughtonii
17512875 17512875 PRJNA951388_S_NODE_11274_length_243_cov_2.717647_g11147_i0 PRJNA951388 11274 243 2.717647 6.60388221 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.022   NTclustered gi|2912999747|dbj|AP039606.1| 145626 g11147 i0 100 0.11522633744856 28 0 12 0 146 173 2800684 2800657 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 25, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
21336812 21336812 PRJNA951388_S_NODE_11057_length_246_cov_1.780347_g10930_i0 PRJNA951388 11057 246 1.780347 4.37965362 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.022   NTclustered gi|2912988862|dbj|AP039593.1| 145626 g10930 i0 100 0.113821138211382 28 0 11 0 59 86 56766079 56766052 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 12, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;