RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA950981" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA950981 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15290417 15290417 PRJNA950981_P_NODE_8432_length_345_cov_1.147059_g8256_i0 PRJNA950981 8432 345 1.147059 3.95735355 Gastropoda 6448 Mollusca Mollusca 71.3 9.01e-8   NTclustered gi|2245719637|ref|XM_048388712.1| 6454 g8256 i0 95.455 2.66666666666667 44 2 13 0 200 243 376 333 PREDICTED: Haliotis rufescens glycine-rich protein 23-like (LOC124123263), mRNA blastn 920 71.3 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
21335959 21335959 PRJNA950981_P_NODE_20777_length_244_cov_0.912281_g20601_i0 PRJNA950981 20777 244 0.912281 2.22596564 Lottia gigantea 225164 Mollusca Mollusca 154 5.87e-33   NTclustered gi|676488210|ref|XM_009066297.1| 225164 g20601 i0 81.967 1.52049180327869 183 31 75 2 28 209 1353 1172 Lottia gigantea hypothetical protein mRNA blastn 371 154 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;