RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA950981" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA950981 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6036971 6036971 PRJNA950981_P_NODE_14045_length_275_cov_1.356436_g13869_i0 PRJNA950981 14045 275 1.356436 3.730199 Heterostelium album 2086695 Evosea other_Eukaryota 344 3.72e-90   NTclustered gi|1160574132|ref|XM_020577244.1| 670386 g13869 i0 89.888 96.2218181818182 267 27 97 0 9 275 951 685 Polysphondylium pallidum PN500 actin (act10), partial mRNA blastn 26461 344 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
8586815 8586815 PRJNA950981_P_NODE_17107_length_252_cov_0.871508_g16931_i0 PRJNA950981 17107 252 0.871508 2.19620016 Cavenderia fasciculata 261658 Evosea other_Eukaryota 58.4 4.91e-4   NTclustered gi|470249668|ref|XM_004367009.1| 261658 g16931 i0 97.059 0.388888888888889 34 1 13 0 206 239 1136 1103 Cavenderia fasciculata uncharacterized protein (DFA_07200), partial mRNA blastn 98 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
11466279 11466279 PRJNA950981_P_NODE_15549_length_261_cov_1.271277_g15373_i0 PRJNA950981 15549 261 1.271277 3.31803297 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 211 3.71e-50   NTclustered gi|470236159|ref|XM_004349983.1| 261658 g15373 i0 81.928 326.854406130268 249 45 97 0 13 261 431 183 Cavenderia fasciculata uncharacterized protein (DFA_11090), partial mRNA blastn 85309 211 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
17512014 17512014 PRJNA950981_P_NODE_14494_length_271_cov_1.181818_g14318_i0 PRJNA950981 14494 271 1.181818 3.20272678 Acytostelium subglobosum 361139 Evosea other_Eukaryota 161 3.96e-35   NTclustered gi|831772403|ref|XM_012898140.1| 1410327 g14318 i0 81.068 7.60885608856089 206 35 75 4 28 231 216 13 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 2062 161 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
20388784 20388784 PRJNA950981_P_NODE_18416_length_249_cov_0.886364_g18240_i0 PRJNA950981 18416 249 0.886364 2.20704636 Entamoeba 5758 Evosea other_Eukaryota 152 2.1599999999999998e-32   NTclustered gi|416223|dbj|D21259.1|ENHEF2A 5759 g18240 i0 83.537 5.90763052208835 164 25 65 2 87 249 1348 1510 Entamoeba histolytica gene for elongation factor 2, partial cds blastn 1471 152 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
22610814 22610814 PRJNA950981_P_NODE_11658_length_300_cov_2.405286_g11482_i0 PRJNA950981 11658 300 2.405286 7.215858 Acytostelium subglobosum 361139 Evosea other_Eukaryota 300 9.03e-77   NTclustered gi|831769224|ref|XM_012897186.1| 1410327 g11482 i0 85.816 70.4733333333333 282 40 94 0 15 296 690 409 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 21142 300 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;