RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA950981" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA950981 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2209144 2209144 PRJNA950981_P_NODE_12862_length_287_cov_1.093458_g12686_i0 PRJNA950981 12862 287 1.093458 3.13822446 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 63.9 1.23e-5   NTclustered gi|2729094309|ref|XM_065209959.1| 499914 g12686 i0 81.25 3.46341463414634 80 13 28 2 79 157 2275 2197 PREDICTED: Rhopilema esculentum serine-rich adhesin for platelets-like (LOC135691950), mRNA blastn 994 63.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
8586820 8586820 PRJNA950981_P_NODE_18107_length_249_cov_2.482955_g17931_i0 PRJNA950981 18107 249 2.482955 6.18255795 Parvicapsula minibicornis 109801 Cnidaria other_Eukaryota 132 2.81e-26   NTclustered gi|605060084|gb|KF874224.1| 109801 g17931 i0 87.179 49.566265060241 117 13 47 2 3 119 347 233 Parvicapsula minibicornis 28S ribosomal RNA gene, partial sequence blastn 12342 132 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Parvicapsulidae Parvicapsula Parvicapsula minibicornis
8586840 8586840 PRJNA950981_P_NODE_447_length_1309_cov_3.970874_g371_i0 PRJNA950981 447 1309 3.970874 51.97874066 Anemonia sulcata 6108 Cnidaria other_Eukaryota 56.5 0.01   NTclustered gi|2917940745|emb|OZ237569.1| 6108 g371 i0 100 0.0229182582123759 30 0 2 0 1271 1300 7670100 7670129 Anemonia sulcata genome assembly, chromosome: 15 blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
17512026 17512026 PRJNA950981_P_NODE_17654_length_250_cov_2.299435_g17478_i0 PRJNA950981 17654 250 2.299435 5.7485875 Sinuolinea arctica 1483224 Cnidaria other_Eukaryota 80.5 1.04e-10   NTclustered gi|605060087|gb|KF874227.1| 1483224 g17478 i0 80.374 0.552 107 19 42 2 106 211 1273 1378 Sinuolinea arctica 28S ribosomal RNA gene, partial sequence blastn 138 80.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Sinuolineidae Sinuolinea Sinuolinea arctica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;