RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA949785" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA949785 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12412253 12412253 PRJNA949785_P_NODE_14930_length_257_cov_1.255435_g14733_i0 PRJNA949785 14930 257 1.255435 3.22646795 Betacytorhabdovirus phellodendri 3427209 Viruses Viruses 462 9.109999999999999e-126   NTclustered gi|2618835734|tpg|BK064333.1| 3078358 g14733 i0 99.222 1 257 1 100 1 1 257 2034 1779 TPA_asm: Phellodendron betacytorhabdovirus 1 cRNA sequence blastn 257 462 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Betacytorhabdovirus Betacytorhabdovirus phellodendri
12741328 12741328 PRJNA949785_P_NODE_18610_length_242_cov_0.911243_g18413_i0 PRJNA949785 18610 242 0.911243 2.20520806 Paramyxoviridae 11158 Viruses Viruses 436 5.1499999999999985e-118   NTclustered gi|146351838|gb|EF543648.1| 149595 g18413 i0 99.174 70 242 2 100 0 1 242 1266 1025 Canine parainfluenza virus strain FA nucleocapsid (N) gene, complete cds blastn 16940 436 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae   Canine parainfluenza virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;