contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA949785" and tax_phylum = "Bacteroidota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3483789 | 3483789 | PRJNA949785_P_NODE_15403_length_252_cov_1.044693_g15206_i0 | PRJNA949785 | 15403 | 252 | 1.044693 | 2.63262636 | Antarcticibacterium flavum | 2058175 | Bacteria | Bacteria | 446 | 8.969999999999998e-121 | NTclustered | gi|1679650456|gb|CP040812.1| | 2058175 | g15206 | i0 | 99.19 | 243.543650793651 | 247 | 2 | 98 | 0 | 1 | 247 | 536217 | 535971 | Antarcticibacterium flavum strain KCTC 52984 chromosome, complete genome | blastn | 61373 | 446 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Antarcticibacterium | Antarcticibacterium flavum | |
| 3483798 | 3483798 | PRJNA949785_P_NODE_16203_length_249_cov_0.875000_g16006_i0 | PRJNA949785 | 16203 | 249 | 0.875 | 2.17875 | Sphingobacterium thalpophilum | 259 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|2647208394|gb|CP141191.1| | 259 | g16006 | i0 | 100 | 3 | 249 | 0 | 100 | 0 | 1 | 249 | 244907 | 244659 | Sphingobacterium thalpophilum strain YX-3 chromosome, complete genome | blastn | 747 | 460 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Sphingobacterium | Sphingobacterium thalpophilum | |
| 7311138 | 7311138 | PRJNA949785_P_NODE_11146_length_308_cov_1.310638_g10949_i0 | PRJNA949785 | 11146 | 308 | 1.310638 | 4.03676504 | Thermoflavifilum sp. | 1968839 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|1919310413|gb|CP063141.1| | 1968839 | g10949 | i0 | 97.059 | 0.11038961038961 | 34 | 0 | 11 | 1 | 172 | 204 | 302638 | 302605 | Thermoflavifilum sp. isolate Bu77 chromosome | blastn | 34 | 56.5 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Thermoflavifilum | Thermoflavifilum sp. | |
| 8586134 | 8586134 | PRJNA949785_P_NODE_15467_length_251_cov_1.348315_g15270_i0 | PRJNA949785 | 15467 | 251 | 1.348315 | 3.38427065 | Epilithonimonas vandammei | 2487072 | Bacteria | Bacteria | 387 | 5.489999999999998e-103 | NTclustered | gi|1527187866|gb|CP034161.1| | 2487072 | g15270 | i0 | 94.422 | 22.8685258964143 | 251 | 14 | 100 | 0 | 1 | 251 | 519111 | 519361 | Epilithonimonas vandammei strain F5649 chromosome, complete genome | blastn | 5740 | 387 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Epilithonimonas | Epilithonimonas vandammei | |
| 9861161 | 9861161 | PRJNA949785_P_NODE_12368_length_289_cov_1.425926_g12171_i0 | PRJNA949785 | 12368 | 289 | 1.425926 | 4.12092614 | Prevotella intermedia | 28131 | Bacteria | Bacteria | 508 | 1.32e-139 | NTclustered | gi|1276663706|gb|CP024723.1| | 28131 | g12171 | i0 | 98.606 | 107.204152249135 | 287 | 4 | 100 | 0 | 1 | 287 | 1057059 | 1056773 | Prevotella intermedia strain KCOM 2837 chromosome 1, complete sequence | blastn | 30982 | 508 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Prevotellaceae | Prevotella | Prevotella intermedia | |
| 9861189 | 9861189 | PRJNA949785_P_NODE_15968_length_250_cov_0.870056_g15771_i0 | PRJNA949785 | 15968 | 250 | 0.870056 | 2.17514 | uncultured Bacteroides sp. | 162156 | Bacteria | Bacteria | 78.7 | 3.74e-10 | NTclustered | gi|2907625629|emb|OZ223189.1| | 162156 | g15771 | i0 | 97.778 | 0.18 | 45 | 1 | 18 | 0 | 203 | 247 | 620895 | 620939 | MAG: uncultured Bacteroides sp. isolate 83517295-f76d-485f-aefc-f1c63b392a70 genome assembly, chromosome: 1 | blastn | 45 | 78.7 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | uncultured Bacteroides sp. | |
| 11136783 | 11136783 | PRJNA949785_P_NODE_15169_length_254_cov_1.701657_g14972_i0 | PRJNA949785 | 15169 | 254 | 1.701657 | 4.32220878 | Sphingobacterium sp. R2 | 3112958 | Bacteria | Bacteria | 470 | 5.37e-128 | NTclustered | gi|2771686122|gb|CP142884.1| | 3112958 | g14972 | i0 | 100 | 13.7913385826772 | 254 | 0 | 100 | 0 | 1 | 254 | 405749 | 406002 | Sphingobacterium sp. R2 chromosome, complete genome | blastn | 3503 | 470 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Sphingobacterium | Sphingobacterium sp. R2 | |
| 11136832 | 11136832 | PRJNA949785_P_NODE_369_length_1667_cov_5.248432_g322_i0 | PRJNA949785 | 369 | 1667 | 5.248432 | 87.49136144 | Flavobacterium faecale | 1355330 | Bacteria | Bacteria | 54.7 | 0.048 | NTclustered | gi|2922046464|gb|CP182943.1| | 1355330 | g322 | i0 | 100 | 0.0173965206958608 | 29 | 0 | 2 | 0 | 1609 | 1637 | 3558426 | 3558398 | Flavobacterium faecale strain WV33 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium faecale | |
| 12412301 | 12412301 | PRJNA949785_P_NODE_18770_length_242_cov_0.911243_g18573_i0 | PRJNA949785 | 18770 | 242 | 0.911243 | 2.20520806 | Chitinophaga horti | 2920382 | Bacteria | Bacteria | 246 | 9.32e-61 | NTclustered | gi|2321485370|gb|CP107006.1| | 2920382 | g18573 | i0 | 85.356 | 1.90082644628099 | 239 | 33 | 98 | 2 | 5 | 242 | 5184287 | 5184050 | Chitinophaga horti strain R8 chromosome, complete genome | blastn | 460 | 246 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophaga | Chitinophaga horti | |
| 19113350 | 19113350 | PRJNA949785_P_NODE_15135_length_255_cov_0.895604_g14938_i0 | PRJNA949785 | 15135 | 255 | 0.895604 | 2.2837902 | Weeksellaceae | 2762318 | Bacteria | Bacteria | 462 | 9.03e-126 | NTclustered | gi|1576720794|emb|LR215974.1| | 1141221 | g14938 | i0 | 99.222 | 490.43137254902 | 257 | 0 | 100 | 2 | 1 | 255 | 1233040 | 1233296 | Chryseobacterium taihuense strain 3012STDY6944375 genome assembly, chromosome: 1 | blastn | 125060 | 466 | 0.991416309012876 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium taihuense | |
| 19113360 | 19113360 | PRJNA949785_P_NODE_16695_length_247_cov_5.258621_g16498_i0 | PRJNA949785 | 16695 | 247 | 5.258621 | 12.98879387 | Blattabacterium | 34098 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|460838101|dbj|AP012548.1| | 1229512 | g16498 | i0 | 100 | 2.23076923076923 | 29 | 0 | 12 | 0 | 202 | 230 | 538311 | 538283 | Blattabacterium cuenoti BPAA DNA, complete genome | blastn | 551 | 54.7 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Blattabacteriaceae | Blattabacterium | Blattabacterium cuenoti | |
| 20059822 | 20059822 | PRJNA949785_P_NODE_13396_length_276_cov_1.374384_g13199_i0 | PRJNA949785 | 13396 | 276 | 1.374384 | 3.79329984 | Flavobacterium sp. W1B | 3394146 | Bacteria | Bacteria | 339 | 1.7399999999999995e-88 | NTclustered | gi|2898193883|gb|CP178845.1| | 3394146 | g13199 | i0 | 89.051 | 74.6050724637681 | 274 | 28 | 99 | 2 | 3 | 275 | 3300843 | 3300571 | Flavobacterium sp. W1B chromosome | blastn | 20591 | 339 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. W1B | |
| 20059848 | 20059848 | PRJNA949785_P_NODE_15656_length_251_cov_0.865169_g15459_i0 | PRJNA949785 | 15656 | 251 | 0.865169 | 2.17157419 | Bacteroides xylanisolvens | 371601 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|2032857078|gb|CP072212.1| | 371601 | g15459 | i0 | 100 | 46.9003984063745 | 251 | 0 | 100 | 0 | 1 | 251 | 6274265 | 6274515 | Bacteroides xylanisolvens strain CL11T00C41 chromosome, complete genome | blastn | 11772 | 464 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides xylanisolvens | |
| 21335257 | 21335257 | PRJNA949785_P_NODE_15977_length_250_cov_0.870056_g15780_i0 | PRJNA949785 | 15977 | 250 | 0.870056 | 2.17514 | Empedobacter falsenii | 343874 | Bacteria | Bacteria | 446 | 8.89e-121 | NTclustered | gi|1878091573|gb|CP040908.1| | 343874 | g15780 | i0 | 98.8 | 93.24 | 250 | 3 | 100 | 0 | 1 | 250 | 492017 | 492266 | Empedobacter falsenii strain 1681-1 chromosome, complete genome | blastn | 23310 | 446 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Empedobacter | Empedobacter falsenii | |
| 21335265 | 21335265 | PRJNA949785_P_NODE_16497_length_248_cov_0.880000_g16300_i0 | PRJNA949785 | 16497 | 248 | 0.88 | 2.1824 | Empedobacter brevis | 247 | Bacteria | Bacteria | 448 | 2.4499999999999996e-121 | NTclustered | gi|1750497007|gb|CP043634.1| | 247 | g16300 | i0 | 99.194 | 26.6370967741935 | 248 | 2 | 100 | 0 | 1 | 248 | 3397846 | 3397599 | Empedobacter brevis strain SE1-3 chromosome, complete genome | blastn | 6606 | 448 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Empedobacter | Empedobacter brevis | |
| 22610117 | 22610117 | PRJNA949785_P_NODE_11758_length_298_cov_1.328889_g11561_i0 | PRJNA949785 | 11758 | 298 | 1.328889 | 3.96008922 | Hymenobacter sp. 5317J-9 | 2932250 | Bacteria | Bacteria | 425 | 1.42e-114 | NTclustered | gi|2221939013|gb|CP095050.1| | 2932250 | g11561 | i0 | 92.359 | 241.852348993289 | 301 | 19 | 99 | 2 | 2 | 298 | 595588 | 595288 | Hymenobacter sp. 5317J-9 chromosome, complete genome | blastn | 72072 | 425 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Hymenobacter | Hymenobacter sp. 5317J-9 | |
| 24213620 | 24213620 | PRJNA949785_P_NODE_13019_length_281_cov_0.860577_g12822_i0 | PRJNA949785 | 13019 | 281 | 0.860577 | 2.41822137 | Cytophagales | 768507 | Bacteria | Bacteria | 350 | 8.2e-92 | NTclustered | gi|2634447873|gb|CP139724.1| | 333140 | g12822 | i0 | 89.085 | 276.103202846975 | 284 | 27 | 100 | 2 | 1 | 281 | 2112035 | 2111753 | Roseivirga spongicola strain OXR-11 chromosome, complete genome | blastn | 77585 | 350 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Roseivirgaceae | Roseivirga | Roseivirga spongicola | |
| 24213630 | 24213630 | PRJNA949785_P_NODE_14459_length_263_cov_1.068421_g14262_i0 | PRJNA949785 | 14459 | 263 | 1.068421 | 2.80994723 | Cytophagales | 768507 | Bacteria | Bacteria | 307 | 4.6400000000000006e-79 | NTclustered | gi|2333213665|gb|CP110973.1| | 332158 | g14262 | i0 | 88.077 | 238.349809885932 | 260 | 30 | 99 | 1 | 1 | 260 | 2050169 | 2049911 | Larkinella insperata strain LMG22510 chromosome, complete genome | blastn | 62686 | 309 | 0.993527508090615 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Spirosomataceae | Larkinella | Larkinella insperata |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;