RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA949785" and tax_kingdom = "Thermotogati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA949785 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16564485 16564485 PRJNA949785_P_NODE_10733_length_315_cov_1.210744_g10536_i0 PRJNA949785 10733 315 1.210744 3.8138435999999998 Deinococcus 1298 Bacteria Bacteria 547 3.079999999999999e-151   NTclustered gi|1435316362|gb|CP031158.1| 980427 g10536 i0 98.095 459.507936507937 315 5 100 1 1 315 2148243 2147930 Deinococcus wulumuqiensis strain NEB 479 chromosome, complete genome blastn 144745 547 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus wulumuqiensis
21335310 21335310 PRJNA949785_P_NODE_477_length_1539_cov_2.366303_g422_i0 PRJNA949785 477 1539 2.366303 36.41740317 Marinitoga aeolica 2809031 Bacteria Bacteria 54.7 0.044   NTclustered gi|2498963055|gb|CP069362.1| 2809031 g422 i0 100 0.0188434048083171 29 0 2 0 563 591 356958 356986 Marinitoga aeolica strain BP5-C20A chromosome, complete genome blastn 29 54.7 1 Bacteria   Thermotogati Thermotogota Thermotogae Petrotogales Petrotogaceae Marinitoga Marinitoga aeolica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;