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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA946307" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA946307 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2535689 2535689 PRJNA946307_P_NODE_131542_length_170_cov_1.611570_g130668_i0 PRJNA946307 131542 170 1.61157 2.739669 Pyrobaculum 2276 Archaea Archaea 287 3.58e-73   NTclustered gi|18308975|gb|AE009441.1| 178306 g130668 i0 99.367 92.9705882352941 158 1 93 0 13 170 1091392 1091549 Pyrobaculum aerophilum str. IM2, complete genome blastn 15805 287 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum aerophilum
2536245 2536245 PRJNA946307_P_NODE_3702_length_760_cov_7.447257_g3111_i0 PRJNA946307 3702 760 7.447257 56.5991532 root 1 Root_unresolved Root_unresolved 675 0   NTclustered gi|584613410|emb|HG931446.1| 29281 g3111 i0 98.433 88.5526315789474 383 6 59 0 5 387 535 153 Uncultured crenarchaeote partial 16S rRNA gene, clone 2H6_S51 blastn 67300 680 0.992647058823529 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
3476847 3476847 PRJNA946307_P_NODE_135583_length_168_cov_5.815126_g134709_i0 PRJNA946307 135583 168 5.815126 9.76941168 uncultured crenarchaeote 29281 Archaea Archaea 143 8.139999999999998e-30   NTclustered gi|146262968|gb|EF414271.1| 29281 g134709 i0 87.023 118.303571428571 131 12 77 5 4 133 688 562 Uncultured crenarchaeote clone BS80e2H5 putative amoA protein-like (amoA) mRNA, partial sequence blastn 19875 143 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
8912639 8912639 PRJNA946307_P_NODE_118447_length_176_cov_1.480315_g117573_i0 PRJNA946307 118447 176 1.480315 2.6053544 Thermoproteaceae 2267 Archaea Archaea 300 4.8e-77   NTclustered gi|148532178|gb|AY538162.2| 2271 g117573 i0 99.394 93.6306818181818 165 1 94 0 1 165 1309 1145 Thermoproteus tenax strain YS44 16S ribosomal RNA gene, partial sequence blastn 16479 300 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Thermoproteus Thermoproteus tenax
13680144 13680144 PRJNA946307_P_NODE_153891_length_164_cov_0.886957_g153017_i0 PRJNA946307 153891 164 0.886957 1.45460948 Pyrobaculum aerophilum 13773 Archaea Archaea 263 5.809999999999999e-66   NTclustered gi|18308975|gb|AE009441.1| 178306 g153017 i0 98.026 0.926829268292683 152 2 92 1 1 151 1279701 1279550 Pyrobaculum aerophilum str. IM2, complete genome blastn 152 263 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum aerophilum
15288428 15288428 PRJNA946307_P_NODE_31652_length_232_cov_2.792350_g30778_i0 PRJNA946307 31652 232 2.79235 6.478252 Archaea 2157 Archaea Archaea 374 3.9e-99   NTclustered gi|18996831|gb|AF473887.1| 29281 g30778 i0 96.903 99.073275862069 226 1 95 1 1 220 368 143 Uncultured crenarchaeote r-5_08K 16S ribosomal RNA gene, partial sequence blastn 22985 374 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
22603277 22603277 PRJNA946307_P_NODE_139778_length_167_cov_1.728814_g138904_i0 PRJNA946307 139778 167 1.728814 2.88711938 uncultured crenarchaeote 29281 Archaea Archaea 285 1.27e-72   NTclustered gi|22797874|emb|AJ496176.1| 29281 g138904 i0 100 15.1377245508982 154 0 92 0 14 167 7551 7704 Uncultured crenarchaeote 34 kb genomic fragment blastn 2528 285 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
25152689 25152689 PRJNA946307_P_NODE_16200_length_320_cov_3.313653_g15329_i0 PRJNA946307 16200 320 3.313653 10.6036896 uncultured crenarchaeote 29281 Archaea Archaea 316 9.64e-82   NTclustered gi|42557759|emb|AJ627422.1| 29281 g15329 i0 85.621 38.7125 306 39 96 5 3 308 40722 40422 Uncultured crenarchaeote genomic fragment 54d9 blastn 12388 316 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
25152718 25152718 PRJNA946307_P_NODE_16440_length_317_cov_7.078358_g15569_i0 PRJNA946307 16440 317 7.078358 22.43839486 uncultured crenarchaeote 29281 Archaea Archaea 259 1.63e-64   NTclustered gi|42557759|emb|AJ627422.1| 29281 g15569 i0 91.489 47.7507886435331 188 16 59 0 116 303 41690 41503 Uncultured crenarchaeote genomic fragment 54d9 blastn 15137 259 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;