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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA946307" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA946307 · 16 ✖

analysis 1

  • blastn · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
926353 926353 PRJNA946307_P_NODE_151401_length_164_cov_2.539130_g150527_i0 PRJNA946307 151401 164 2.53913 4.1641732 Ploesoma truncatum 2851073 Rotifera other_Eukaryota 189 1e-43   NTclustered gi|83285204|gb|DQ297751.1| 2851073 g150527 i0 89.333 60.4512195121951 150 16 91 0 1 150 219 70 Ploesoma truncatus 28S ribosomal RNA gene, partial sequence blastn 9914 189 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Synchaetidae Ploesoma Ploesoma truncatum
3812782 3812782 PRJNA946307_P_NODE_60203_length_206_cov_22.764331_g59329_i0 PRJNA946307 60203 206 22.764331 46.89452186 Synchaeta 204744 Rotifera other_Eukaryota 351 1.5899999999999995e-92   NTclustered gi|1516482269|gb|MH481723.1| 1156574 g59329 i0 100 92.1456310679612 190 0 92 0 3 192 820 631 Synchaeta oblonga isolate 200616_ST_I1 18S small subunit ribosomal RNA gene, partial sequence blastn 18982 351 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Synchaetidae Synchaeta Synchaeta oblonga
4755371 4755371 PRJNA946307_P_NODE_27004_length_248_cov_3.623116_g26130_i0 PRJNA946307 27004 248 3.623116 8.98532768 Adineta vaga complex sp. B JFF-2016 1813165 Rotifera other_Eukaryota 435 1.91e-117   NTclustered gi|1005055631|gb|KU860774.1| 1813165 g26130 i0 100 46.3266129032258 235 0 95 0 1 235 1323 1089 Adineta vaga complex sp. B JFF-2016 isolate H158a 28S ribosomal RNA gene, partial sequence blastn 11489 435 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. B JFF-2016
8912932 8912932 PRJNA946307_P_NODE_155887_length_163_cov_2.456140_g155013_i0 PRJNA946307 155887 163 2.45614 4.0035082 Ploima 84394 Rotifera other_Eukaryota 226 7.559999999999997e-55   NTclustered gi|478683563|gb|KC193096.1| 104777 g155013 i0 93.96 47.7546012269939 149 9 91 0 1 149 1640 1492 Brachionus calyciflorus 28S ribosomal RNA gene, partial sequence blastn 7784 226 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
11129650 11129650 PRJNA946307_P_NODE_127869_length_171_cov_6.418033_g126995_i0 PRJNA946307 127869 171 6.418033 10.97483643 Brachionus diversicornis 396694 Rotifera other_Eukaryota 278 2.17e-70   NTclustered gi|398258230|gb|JN605278.1| 396694 g126995 i0 99.346 89.4736842105263 153 1 89 0 4 156 436 284 Brachionus diversicornis isolate TC21 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 15300 278 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus diversicornis
13679745 13679745 PRJNA946307_P_NODE_13071_length_362_cov_4.399361_g12203_i0 PRJNA946307 13071 362 4.399361 15.92568682 Asplanchna sieboldii 84397 Rotifera other_Eukaryota 569 7.659999999999997e-158   NTclustered gi|61200811|gb|AY829085.1| 84397 g12203 i0 96.254 93.5580110497238 347 13 96 0 15 361 1433 1779 Asplanchna sieboldi 28S ribosomal RNA gene, partial sequence blastn 33868 569 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sieboldii
13680202 13680202 PRJNA946307_P_NODE_157091_length_163_cov_1.508772_g156217_i0 PRJNA946307 157091 163 1.508772 2.45929836 Rotaria rotatoria 231624 Rotifera other_Eukaryota 270 3.4499999999999993e-68   NTclustered gi|109892432|gb|DQ656807.1| 231624 g156217 i0 99.329 87.558282208589 149 1 91 0 1 149 1041 893 Rotaria rotatoria isolate UK.3.6 28S ribosomal RNA gene, partial sequence blastn 14272 270 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
14013943 14013943 PRJNA946307_P_NODE_133671_length_169_cov_2.116667_g132797_i0 PRJNA946307 133671 169 2.116667 3.57716723 Ploima 84394 Rotifera other_Eukaryota 263 5.989999999999999e-66   NTclustered gi|1845957847|gb|MT522671.1| 47121 g132797 i0 97.419 91.7159763313609 155 2 91 1 4 156 1119 965 Notommata copeus isolate JH_005H10 small subunit ribosomal RNA gene, partial sequence blastn 15500 263 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Notommatidae Notommata Notommata copeus
14014469 14014469 PRJNA946307_P_NODE_36611_length_218_cov_5.207101_g35737_i0 PRJNA946307 36611 218 5.207101 11.35148018 Ploima 84394 Rotifera other_Eukaryota 239 1.38e-58   NTclustered gi|68271573|gb|DQ086754.1| 333509 g35737 i0 87.5 95.3899082568807 208 24 94 1 1 206 225 18 Uncultured Rotifera isolate ROTATO10 large subunit ribosomal RNA gene, partial sequence blastn 20795 239 1 Eukaryota Opisthokonta Metazoa Rotifera         uncultured Rotifera
15288256 15288256 PRJNA946307_P_NODE_174812_length_150_cov_4.158416_g173938_i0 PRJNA946307 174812 150 4.158416 6.237624 Adineta 104781 Rotifera other_Eukaryota 261 1.86e-65   NTclustered gi|1127547405|gb|JQ999603.2| 1193592 g173938 i0 98.639 27.78 147 2 98 0 1 147 270 416 Adineta environmental sample clone GKJWQY101BXQZY 28S ribosomal RNA gene, partial sequence blastn 4167 261 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta environmental sample
16229254 16229254 PRJNA946307_P_NODE_148933_length_165_cov_1.224138_g148059_i0 PRJNA946307 148933 165 1.224138 2.0198277 Lecane bulla 96446 Rotifera other_Eukaryota 243 7.63e-60   NTclustered gi|61200802|gb|AY829083.1| 96446 g148059 i0 95.395 10.8181818181818 152 7 92 0 14 165 1834 1985 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 1785 243 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
17506328 17506328 PRJNA946307_P_NODE_8954_length_457_cov_8.281863_g8122_i0 PRJNA946307 8954 457 8.281863 37.84811391 Asplanchna sieboldii 84397 Rotifera other_Eukaryota 368 3.88e-97   NTclustered gi|61200811|gb|AY829085.1| 84397 g8122 i0 90.459 33.2078774617068 283 21 83 4 1 277 2095 1813 Asplanchna sieboldi 28S ribosomal RNA gene, partial sequence blastn 15176 368 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sieboldii
19112258 19112258 PRJNA946307_P_NODE_80175_length_194_cov_1.048276_g79301_i0 PRJNA946307 80175 194 1.048276 2.03365544 Adineta 104781 Rotifera other_Eukaryota 291 3.2599999999999993e-74   NTclustered gi|72153731|gb|DQ089739.1| 104782 g79301 i0 95.604 54.9536082474227 182 6 93 1 15 194 1968 2149 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 10661 291 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
22938144 22938144 PRJNA946307_P_NODE_25538_length_255_cov_1.611650_g24664_i0 PRJNA946307 25538 255 1.61165 4.1097075 Eurotatoria 2816136 Rotifera other_Eukaryota 412 9.23e-111   NTclustered gi|72153731|gb|DQ089739.1| 104782 g24664 i0 97.51 71.0745098039216 241 6 95 0 15 255 2550 2790 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 18124 412 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
23879631 23879631 PRJNA946307_P_NODE_30199_length_237_cov_1.058511_g29325_i0 PRJNA946307 30199 237 1.058511 2.50867107 Plationus patulus 360686 Rotifera other_Eukaryota 287 5.359999999999999e-73   NTclustered gi|83285203|gb|DQ297750.1| 360686 g29325 i0 90.783 71.9746835443038 217 17 91 2 15 230 297 511 Plationus patulus 28S ribosomal RNA gene, partial sequence blastn 17058 287 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Plationus Plationus patulus
25154450 25154450 PRJNA946307_P_NODE_9940_length_427_cov_8.589947_g9093_i0 PRJNA946307 9940 427 8.589947 36.67907369 Asplanchna sieboldii 84397 Rotifera other_Eukaryota 318 3.68e-82   NTclustered gi|61200811|gb|AY829085.1| 84397 g9093 i0 89.453 34.7236533957845 256 21 83 4 178 427 1840 2095 Asplanchna sieboldi 28S ribosomal RNA gene, partial sequence blastn 14827 318 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sieboldii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;