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contig_metadata

26 rows where analysis = "blastn", bioproject = "PRJNA946307" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 26 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA946307 · 26 ✖

analysis 1

  • blastn · 26 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
926806 926806 PRJNA946307_P_NODE_20121_length_285_cov_3.474576_g19249_i0 PRJNA946307 20121 285 3.474576 9.9025416 Rhizopus arrhizus 64495 Fungi Fungi 510 3.61e-140   NTclustered gi|58578599|ref|NC_006836.1| 64495 g19249 i0 99.291 29.9649122807018 282 2 99 0 4 285 1456 1175 Rhizopus oryzae mitochondrion, complete genome blastn 8540 510 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus arrhizus
927730 927730 PRJNA946307_P_NODE_67781_length_199_cov_3.900000_g66907_i0 PRJNA946307 67781 199 3.9 7.761 Rhizomucor miehei 4839 Fungi Fungi 183 5.87e-42   NTclustered gi|225134684|gb|FJ345356.1| 4839 g66907 i0 100 10.7688442211055 99 0 92 0 100 198 3852 3950 Rhizomucor miehei strain ATCC 46345 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 2143 183 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor miehei
1260352 1260352 PRJNA946307_P_NODE_23881_length_263_cov_1.574766_g23007_i0 PRJNA946307 23881 263 1.574766 4.14163458 Mucor 4830 Fungi Fungi 374 4.5099999999999984e-99   NTclustered gi|358001175|gb|JN938898.1| 4841 g23007 i0 93.651 87.8593155893536 252 13 95 3 1 251 847 598 Mucor racemosus strain DAOM 229663 28S ribosomal RNA (LSU) gene, partial sequence blastn 23107 374 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
2202661 2202661 PRJNA946307_P_NODE_47402_length_210_cov_4.049689_g46528_i0 PRJNA946307 47402 210 4.049689 8.5043469 Lichtheimia corymbifera 42458 Fungi Fungi 350 5.84e-92   NTclustered gi|225131089|gb|FJ345350.1| 42458 g46528 i0 99.479 30.8952380952381 192 1 91 0 15 206 2339 2530 Mycocladus corymbiferus strain ATCC 14058 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6488 350 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia corymbifera
2203100 2203100 PRJNA946307_P_NODE_72982_length_198_cov_3.771812_g72108_i0 PRJNA946307 72982 198 3.771812 7.46818776 Halteromyces radiatus 101107 Fungi Fungi 73.1 1.32e-8   NTclustered gi|2323758900|ref|XM_051541723.1| 101107 g72108 i0 86.364 0.333333333333333 66 9 33 0 120 185 147 212 Halteromyces radiatus eukaryotic peptide chain release factor subunit 1 (BX664DRAFT_286864), mRNA blastn 66 73.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
2536695 2536695 PRJNA946307_P_NODE_87862_length_189_cov_4.128571_g86988_i0 PRJNA946307 87862 189 4.128571 7.80299919 Fungi 4751 Fungi Fungi 316 5.21e-82   NTclustered gi|769961105|gb|KM017677.1| 41833 g86988 i0 99.425 91.6190476190476 174 1 92 0 15 188 783 956 Umbelopsis ramanniana strain CGMCC 3.16356 18S ribosomal RNA gene, partial sequence blastn 17316 316 1 Eukaryota Opisthokonta Fungi Mucoromycota Umbelopsidomycetes Umbelopsidales Umbelopsidaceae Umbelopsis Umbelopsis ramanniana
5089180 5089180 PRJNA946307_P_NODE_77864_length_195_cov_9.006849_g76990_i0 PRJNA946307 77864 195 9.006849 17.56335555 Fungi 4751 Fungi Fungi 248 2e-61   NTclustered gi|530339809|gb|KC666029.1| 4874 g76990 i0 92.529 89.2102564102564 174 12 89 1 23 195 404 577 Gigaspora margarita isolate WDG47 18S ribosomal RNA gene, partial sequence blastn 17396 248 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
7638661 7638661 PRJNA946307_P_NODE_5106_length_641_cov_6.853041_g4414_i0 PRJNA946307 5106 641 6.853041 43.92799281 Mucorales 4827 Fungi Fungi 130 2.86e-25   NTclustered gi|82398553|gb|DQ273817.1| 4846 g4414 i0 87.069 6.94539781591264 116 13 18 2 75 189 1546 1660 Rhizopus stolonifer isolate AFTOL-ID 632 28S ribosomal RNA gene, partial sequence blastn 4452 130 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
8912780 8912780 PRJNA946307_P_NODE_13647_length_352_cov_688.834983_g12777_i0 PRJNA946307 13647 352 688.834983 2424.69914016 Fungi 4751 Fungi Fungi 564 3.4599999999999995e-156   NTclustered gi|1772639889|gb|MN644615.1| 64495 g12777 i0 96.221 109.886363636364 344 13 98 0 1 344 490 833 Rhizopus arrhizus voucher research collection Farrer lab 262 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 38680 569 0.991212653778559 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus arrhizus
11129308 11129308 PRJNA946307_P_NODE_108369_length_180_cov_2.618321_g107495_i0 PRJNA946307 108369 180 2.618321 4.7129778 Rhizopus microsporus 58291 Fungi Fungi 191 3.1e-44   NTclustered gi|2627921318|ref|NC_084442.1| 58291 g107495 i0 93.13 5.85 131 7 73 1 50 180 41898 42026 Rhizopus microsporus mitochondrion, complete genome blastn 1053 191 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus
11131844 11131844 PRJNA946307_P_NODE_9649_length_435_cov_14.515544_g8807_i0 PRJNA946307 9649 435 14.515544 63.1426164 Glomus sp. Tf 2-16 262042 Fungi Fungi 765 0   NTclustered gi|41353938|gb|AY522919.1| 262042 g8807 i0 99.292 85.583908045977 424 1 97 2 13 434 18 441 Glomus sp. Tf 2-16 26S ribosomal RNA gene, partial sequence blastn 37229 765 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Glomus Glomus sp. Tf 2-16
12407142 12407142 PRJNA946307_P_NODE_83930_length_191_cov_3.929577_g83056_i0 PRJNA946307 83930 191 3.929577 7.50549207 Mucor racemosus 4841 Fungi Fungi 327 2.44e-85   NTclustered gi|225134681|gb|FJ345353.1| 4841 g83056 i0 100 4.63874345549738 177 0 93 0 1 177 3958 3782 Mucor racemosus strain ATCC 42647 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 886 327 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
14954385 14954385 PRJNA946307_P_NODE_156572_length_163_cov_1.701754_g155698_i0 PRJNA946307 156572 163 1.701754 2.77385902 Calcarisporiella thermophila 911321 Fungi Fungi 60.2 8.12e-5   NTclustered gi|2837820978|ref|XM_069393076.1| 911321 g155698 i0 88.462 0.319018404907975 52 3 31 3 5 54 391 341 Calcarisporiella thermophila uncharacterized protein (VTP21DRAFT_284), partial mRNA blastn 52 60.2 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila
14955937 14955937 PRJNA946307_P_NODE_85872_length_190_cov_3.056738_g84998_i0 PRJNA946307 85872 190 3.056738 5.8078022 Mucor velutinosus 708070 Fungi Fungi 257 3.2200000000000005e-64   NTclustered gi|2724892199|ref|XM_064826060.1| 708070 g84998 i0 93.143 5.52105263157895 175 12 92 0 14 188 39 213 Mucor velutinosus ssDNA endonuclease and repair protein rad10 (RAD10), partial mRNA blastn 1049 257 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus
15288727 15288727 PRJNA946307_P_NODE_6452_length_560_cov_13.671233_g5681_i0 PRJNA946307 6452 560 13.671233 76.5589048 Eukaryota 2759 Fungi Fungi 1005 0   NTclustered gi|1272210360|gb|KY780631.1| 4846 g5681 i0 100 96.25 544 0 97 0 15 558 586 1129 Rhizopus stolonifer strain cy3 18S ribosomal RNA gene, partial sequence blastn 53900 1005 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
17505911 17505911 PRJNA946307_P_NODE_65334_length_200_cov_2.947020_g64460_i0 PRJNA946307 65334 200 2.94702 5.89404 Mucor racemosus 4841 Fungi Fungi 315 2.0099999999999999e-81   NTclustered gi|225134681|gb|FJ345353.1| 4841 g64460 i0 97.814 10.37 183 3 92 1 15 197 2184 2365 Mucor racemosus strain ATCC 42647 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 2074 315 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
18778656 18778656 PRJNA946307_P_NODE_21775_length_274_cov_3.662222_g20902_i0 PRJNA946307 21775 274 3.662222 10.03448828 Phycomyces blakesleeanus 4837 Fungi Fungi 267 8.26e-67   NTclustered gi|918020497|ref|NC_027730.1| 4837 g20902 i0 98.667 56.6532846715328 150 2 89 0 1 150 3538 3389 Phycomyces blakesleeanus strain NRRL 1555 mitochondrion, complete genome blastn 15523 267 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
18779271 18779271 PRJNA946307_P_NODE_56675_length_210_cov_2.801242_g55801_i0 PRJNA946307 56675 210 2.801242 5.8826082 Rhizomucor pusillus 4840 Fungi Fungi 80.5 8.45e-11   NTclustered gi|2837762229|ref|XM_069384180.1| 4840 g55801 i0 91.379 0.276190476190476 58 5 28 0 30 87 742 685 Rhizomucor pusillus uncharacterized protein (VTP01DRAFT_5393), partial mRNA blastn 58 80.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
18779846 18779846 PRJNA946307_P_NODE_8795_length_462_cov_35.898305_g7967_i0 PRJNA946307 8795 462 35.898305 165.8501691 Rhizopus stolonifer 4846 Fungi Fungi 830 0   NTclustered gi|82398553|gb|DQ273817.1| 4846 g7967 i0 100 99.7251082251082 449 0 97 0 14 462 1600 2048 Rhizopus stolonifer isolate AFTOL-ID 632 28S ribosomal RNA gene, partial sequence blastn 46073 830 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
19111095 19111095 PRJNA946307_P_NODE_10435_length_415_cov_11.814208_g9583_i0 PRJNA946307 10435 415 11.814208 49.0289632 Fungi 4751 Fungi Fungi 636 8.659999999999999e-178   NTclustered gi|1402384622|gb|MH483598.1| 64518 g9583 i0 97.326 88.421686746988 374 9 90 1 3 376 373 1 Mortierella alpina isolate CK595 large subunit ribosomal RNA gene, partial sequence blastn 36695 638 0.996865203761755 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Mortierella Mortierella alpina
19111282 19111282 PRJNA946307_P_NODE_125955_length_172_cov_3.162602_g125081_i0 PRJNA946307 125955 172 3.162602 5.43967544 Opisthokonta 33154 Fungi Fungi 110 8.44e-20   NTclustered gi|82398570|gb|DQ273828.1| 4876 g125081 i0 92.208 56.1511627906977 77 6 45 0 89 165 2748 2824 Glomus intraradices isolate AFTOL-ID 845 28S ribosomal RNA gene, partial sequence blastn 9658 111 0.990990990990991 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus intraradices
19111977 19111977 PRJNA946307_P_NODE_43875_length_211_cov_2.870370_g43001_i0 PRJNA946307 43875 211 2.87037 6.0564807 Lichtheimia 688353 Fungi Fungi 182 2.27e-41   NTclustered gi|426202457|gb|JQ775460.1| 42458 g43001 i0 100 88.3175355450237 98 0 89 0 112 209 855 952 Lichtheimia corymbifera strain FSU10179 18S ribosomal RNA gene, partial sequence blastn 18635 182 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia corymbifera
21663383 21663383 PRJNA946307_P_NODE_99237_length_184_cov_3.459259_g98363_i0 PRJNA946307 99237 184 3.459259 6.36503656 Fungi 4751 Fungi Fungi 315 1.81e-81   NTclustered gi|1768664880|emb|LR730779.1| 4876 g98363 i0 100 92.3913043478261 170 0 92 0 15 184 6 175 Rhizophagus intraradices 28S large subunit ribosomal RNA gene, partial sequence, isolate 067_A06_134 blastn 17000 315 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus intraradices
22938418 22938418 PRJNA946307_P_NODE_5138_length_639_cov_6.581356_g4414_i1 PRJNA946307 5138 639 6.581356 42.05486484 Mucorales 4827 Fungi Fungi 130 2.8499999999999997e-25   NTclustered gi|82398553|gb|DQ273817.1| 4846 g4414 i1 87.069 6.96713615023474 116 13 18 2 451 565 1660 1546 Rhizopus stolonifer isolate AFTOL-ID 632 28S ribosomal RNA gene, partial sequence blastn 4452 130 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
22938666 22938666 PRJNA946307_P_NODE_80358_length_193_cov_5.006944_g79484_i0 PRJNA946307 80358 193 5.006944 9.66340192 Fungi 4751 Fungi Fungi 300 5.3800000000000004e-77   NTclustered gi|658131632|emb|HF968958.1| 4874 g79484 i0 96.685 18.0362694300518 181 4 93 1 15 193 2004 2184 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 3481 300 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
25486916 25486916 PRJNA946307_P_NODE_18700_length_296_cov_6.902834_g17829_i0 PRJNA946307 18700 296 6.902834 20.43238864 Fungi 4751 Fungi Fungi 448 2.9999999999999986e-121   NTclustered gi|2580278665|gb|OR581588.1| 4841 g17829 i0 95.39 94.8175675675676 282 11 95 2 1 282 924 645 Mucor racemosus culture VKM:F-579 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 28066 448 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;