RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA946307" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA946307 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12405013 12405013 PRJNA946307_P_NODE_121790_length_174_cov_2.352000_g120916_i0 PRJNA946307 121790 174 2.352 4.09248 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 124 3.0599999999999998e-24   NTclustered gi|1958088527|gb|CP065001.1| 2049428 g120916 i0 81.41 28.5459770114943 156 25 90 4 1 156 609442 609291 Ignavibacteriales bacterium isolate Kalu_18-Q3-R12-55_MAXAC.127v2 chromosome, complete genome blastn 4967 124 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
20052569 20052569 PRJNA946307_P_NODE_126276_length_172_cov_2.382114_g125402_i0 PRJNA946307 126276 172 2.382114 4.09723608 Ignavibacterium sp. 2651167 Bacteria Bacteria 54.7 0.004   NTclustered gi|2314740639|dbj|AP026678.1| 2651167 g125402 i0 100 0.168604651162791 29 0 17 0 53 81 1402622 1402650 MAG: Ignavibacterium sp. KatS3mg037 DNA, complete genome blastn 29 54.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium sp.
23878468 23878468 PRJNA946307_P_NODE_120039_length_175_cov_1.769841_g119165_i0 PRJNA946307 120039 175 1.769841 3.09722175 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 178 2.3299999999999993e-40   NTclustered gi|2621704225|emb|OY761615.1| 2651163 g119165 i0 89.362 4.43428571428571 141 15 81 0 1 141 3101165 3101025 MAG: Ignavibacteriaceae bacterium isolate 0c874fb2-9291-49ee-bde1-826c4484edf3 genome assembly, chromosome: 1 blastn 776 178 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;