RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA946307" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA946307 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
925984 925984 PRJNA946307_P_NODE_12961_length_364_cov_3.333333_g12095_i0 PRJNA946307 12961 364 3.333333 12.13333212 Rozella sp. 1932610 Fungi Fungi 141 7.17e-29   NTclustered gi|2468791001|gb|OQ702917.1| 1932610 g12095 i0 92 27.7335164835165 100 8 27 0 126 225 3402 3501 Rozella sp. isolate PSC230 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 10095 141 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella sp.
2202742 2202742 PRJNA946307_P_NODE_52442_length_210_cov_3.118012_g51568_i0 PRJNA946307 52442 210 3.118012 6.5478252 Cryptomycota sp. 2012228 Fungi Fungi 139 1.38e-28   NTclustered gi|2468791071|gb|OQ702935.1| 2012228 g51568 i0 96.429 38.7571428571429 84 3 40 0 111 194 3495 3412 Cryptomycota sp. isolate PSC281 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8139 139 1 Eukaryota Opisthokonta Fungi Cryptomycota         Cryptomycota sp.
3477647 3477647 PRJNA946307_P_NODE_23563_length_264_cov_4.720930_g22689_i0 PRJNA946307 23563 264 4.72093 12.4632552 Cryptomycota sp. 2012228 Fungi Fungi 311 3.6e-80   NTclustered gi|2468790980|gb|OQ702912.1| 2012228 g22689 i0 89.2 44.1666666666667 250 18 94 2 1 248 4126 3884 Cryptomycota sp. isolate PSC211 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11660 311 1 Eukaryota Opisthokonta Fungi Cryptomycota         Cryptomycota sp.
11129421 11129421 PRJNA946307_P_NODE_114689_length_177_cov_3.414062_g113815_i0 PRJNA946307 114689 177 3.414062 6.04288974 Cryptomycota sp. 2012228 Fungi Fungi 145 2.4e-30   NTclustered gi|2468791035|gb|OQ702926.1| 2012228 g113815 i0 94.681 51.5875706214689 94 4 53 1 3 95 3450 3543 Cryptomycota sp. isolate PSC258 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9131 145 1 Eukaryota Opisthokonta Fungi Cryptomycota         Cryptomycota sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;