RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA946307" and tax_clade = "dsRNA viruses"

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tax_superkingdom 1

tax_clade 1

  • dsRNA viruses · 1 ✖

bioproject 1

  • PRJNA946307 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11129958 11129958 PRJNA946307_P_NODE_144729_length_166_cov_1.333333_g143855_i0 PRJNA946307 144729 166 1.333333 2.21333278 Sclerotinia sclerotiorum dsRNA mycovirus-L 1181310 Viruses Viruses 248 1.65e-61   NTclustered gi|955660115|emb|LN827951.1| 1181310 g143855 i0 96.053 2.74698795180723 152 6 92 0 14 165 895 1046 Sclerotinia sclerotiorum dsRNA mycovirus-L RdRp gene for RNA dependent RNA polymerase, isolate HAZ2-2 blastn 456 248 1 Viruses dsRNA viruses             Sclerotinia sclerotiorum dsRNA mycovirus-L

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;