contig_metadata
20 rows where analysis = "blastn", bioproject = "PRJNA946307" and tax_clade = "delta/epsilon subdivisions"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 925661 | 925661 | PRJNA946307_P_NODE_11001_length_402_cov_4.070822_g10142_i0 | PRJNA946307 | 11001 | 402 | 4.070822 | 16.36470444 | Dissulfurimicrobium hydrothermale | 1750598 | Bacteria | Bacteria | 137 | 1.03e-27 | NTclustered | gi|2190143862|gb|CP085041.1| | 1750598 | g10142 | i0 | 82.895 | 12.271144278607 | 152 | 26 | 38 | 0 | 123 | 274 | 311534 | 311685 | Dissulfurimicrobium hydrothermale strain Sh68 chromosome, complete genome | blastn | 4933 | 137 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Dissulfurimicrobium | Dissulfurimicrobium hydrothermale | |||||
| 2201852 | 2201852 | PRJNA946307_P_NODE_16222_length_320_cov_2.453875_g15351_i0 | PRJNA946307 | 16222 | 320 | 2.453875 | 7.8524 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 372 | 2.03e-98 | NTclustered | gi|374854163|dbj|AP011765.1| | 34034 | g15351 | i0 | 88.562 | 136.44375 | 306 | 35 | 96 | 0 | 1 | 306 | 13367 | 13062 | Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 | blastn | 43662 | 372 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 2202015 | 2202015 | PRJNA946307_P_NODE_17202_length_310_cov_2.674330_g16331_i0 | PRJNA946307 | 17202 | 310 | 2.67433 | 8.290423 | Bradymonas sediminis | 1548548 | Bacteria | Bacteria | 416 | 8.91e-112 | NTclustered | gi|1406952946|gb|CP030032.1| | 1548548 | g16331 | i0 | 93.448 | 70.058064516129 | 290 | 3 | 95 | 3 | 15 | 304 | 95611 | 95884 | Bradymonas sediminis strain FA350 chromosome, complete genome | blastn | 21718 | 416 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Bradymonas | Bradymonas sediminis | |||
| 2535619 | 2535619 | PRJNA946307_P_NODE_123642_length_173_cov_3.451613_g122768_i0 | PRJNA946307 | 123642 | 173 | 3.451613 | 5.97129049 | Bacteria | 2 | Bacteria | Bacteria | 176 | 8.26e-40 | NTclustered | gi|219811383|gb|FJ551597.1| | 34034 | g122768 | i0 | 94.737 | 71.0231213872832 | 114 | 4 | 65 | 1 | 15 | 126 | 920 | 1033 | Uncultured delta proteobacterium clone LTSP_BACT_P3O04 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 12287 | 176 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 2536665 | 2536665 | PRJNA946307_P_NODE_84602_length_191_cov_2.316901_g83728_i0 | PRJNA946307 | 84602 | 191 | 2.316901 | 4.42528091 | Bacillota | 1239 | Bacteria | Bacteria | 163 | 7.27e-36 | NTclustered | gi|2190143862|gb|CP085041.1| | 1750598 | g83728 | i0 | 96.907 | 1.03141361256544 | 97 | 3 | 51 | 0 | 92 | 188 | 1870427 | 1870523 | Dissulfurimicrobium hydrothermale strain Sh68 chromosome, complete genome | blastn | 197 | 163 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Dissulfurimicrobium | Dissulfurimicrobium hydrothermale | |||||
| 8913208 | 8913208 | PRJNA946307_P_NODE_28727_length_241_cov_10.973958_g27853_i0 | PRJNA946307 | 28727 | 241 | 10.973958 | 26.44723878 | Bacteria | 2 | Bacteria | Bacteria | 388 | 1.46e-103 | NTclustered | gi|148749607|gb|EF636480.1| | 34034 | g27853 | i0 | 100 | 86.9004149377593 | 210 | 0 | 87 | 0 | 32 | 241 | 180 | 389 | Uncultured delta proteobacterium isolate DGGE gel band 9 16S ribosomal RNA gene, partial sequence | blastn | 20943 | 388 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 9855964 | 9855964 | PRJNA946307_P_NODE_82108_length_192_cov_3.307692_g81234_i0 | PRJNA946307 | 82108 | 192 | 3.307692 | 6.35076864 | uncultured delta proteobacterium HF0070_10I02 | 710824 | Bacteria | Bacteria | 252 | 1.52e-62 | NTclustered | gi|297181000|gb|GU474857.1| | 710824 | g81234 | i0 | 93.023 | 150.359375 | 172 | 12 | 90 | 0 | 7 | 178 | 6821 | 6650 | Uncultured delta proteobacterium HF0070_10I02 genomic sequence | blastn | 28869 | 252 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium HF0070_10I02 | ||||||
| 10189371 | 10189371 | PRJNA946307_P_NODE_51648_length_210_cov_3.310559_g50774_i0 | PRJNA946307 | 51648 | 210 | 3.310559 | 6.9521739 | Bacteria | 2 | Bacteria | Bacteria | 185 | 1.74e-42 | NTclustered | gi|892164907|gb|KT182521.1| | 34034 | g50774 | i0 | 100 | 59.2142857142857 | 100 | 0 | 89 | 0 | 111 | 210 | 762 | 861 | Uncultured delta proteobacterium clone MBR Cr 0.4ppm 24 16S ribosomal RNA gene, partial sequence | blastn | 12435 | 185 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 11129164 | 11129164 | PRJNA946307_P_NODE_100329_length_184_cov_1.481481_g99455_i0 | PRJNA946307 | 100329 | 184 | 1.481481 | 2.72592504 | Bradymonas sediminis | 1548548 | Bacteria | Bacteria | 303 | 3.92e-78 | NTclustered | gi|1406952946|gb|CP030032.1| | 1548548 | g99455 | i0 | 99.401 | 0.907608695652174 | 167 | 1 | 91 | 0 | 15 | 181 | 2294403 | 2294237 | Bradymonas sediminis strain FA350 chromosome, complete genome | blastn | 167 | 303 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Bradymonas | Bradymonas sediminis | |||
| 12405418 | 12405418 | PRJNA946307_P_NODE_143310_length_166_cov_2.444444_g142436_i0 | PRJNA946307 | 143310 | 166 | 2.444444 | 4.05777704 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 259 | 7.63e-65 | NTclustered | gi|451917356|gb|KC451220.1| | 34034 | g142436 | i0 | 97.368 | 61.1927710843374 | 152 | 4 | 92 | 0 | 3 | 154 | 314 | 163 | Uncultured delta proteobacterium clone RLBp2603 16S ribosomal RNA gene, partial sequence | blastn | 10158 | 259 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 14955777 | 14955777 | PRJNA946307_P_NODE_76492_length_196_cov_4.421769_g75618_i0 | PRJNA946307 | 76492 | 196 | 4.421769 | 8.66666724 | Deltaproteobacteria bacterium Smac51 | 2946587 | Bacteria | Bacteria | 152 | 1.6199999999999998e-32 | NTclustered | gi|2242725236|gb|CP026657.1| | 2946587 | g75618 | i0 | 84.416 | 280.122448979592 | 154 | 24 | 79 | 0 | 41 | 194 | 2066818 | 2066665 | Deltaproteobacteria bacterium Smac51 chromosome, complete genome | blastn | 54904 | 152 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium Smac51 | ||||||
| 19111950 | 19111950 | PRJNA946307_P_NODE_40755_length_212_cov_3.441718_g39881_i0 | PRJNA946307 | 40755 | 212 | 3.441718 | 7.29644216 | Bacteria | 2 | Bacteria | Bacteria | 102 | 1.82e-17 | NTclustered | gi|297181813|gb|GU474879.1| | 710831 | g39881 | i0 | 86.813 | 0.905660377358491 | 91 | 12 | 43 | 0 | 26 | 116 | 14823 | 14733 | Uncultured delta proteobacterium HF0200_19J16 genomic sequence | blastn | 192 | 102 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium HF0200_19J16 | ||||||
| 20387319 | 20387319 | PRJNA946307_P_NODE_92456_length_187_cov_3.818841_g91582_i0 | PRJNA946307 | 92456 | 187 | 3.818841 | 7.14123267 | Bacteria | 2 | Bacteria | Bacteria | 303 | 4e-78 | NTclustered | gi|927354472|gb|KT323006.1| | 34034 | g91582 | i0 | 97.727 | 93.2459893048128 | 176 | 4 | 94 | 0 | 1 | 176 | 178 | 3 | Uncultured delta proteobacterium clone TGR_WLFZ-826 16S ribosomal RNA gene, partial sequence | blastn | 17437 | 303 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 22603104 | 22603104 | PRJNA946307_P_NODE_129798_length_171_cov_1.532787_g128924_i0 | PRJNA946307 | 129798 | 171 | 1.532787 | 2.62106577 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 110 | 8.38e-20 | NTclustered | gi|2874253999|emb|OY970324.1| | 34034 | g128924 | i0 | 80.405 | 0.865497076023392 | 148 | 25 | 85 | 4 | 5 | 150 | 544477 | 544332 | MAG: uncultured delta proteobacterium isolate MFD05502.bin.1.132 genome assembly, chromosome: 1 | blastn | 148 | 110 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 22605005 | 22605005 | PRJNA946307_P_NODE_81978_length_192_cov_3.839161_g81104_i0 | PRJNA946307 | 81978 | 192 | 3.839161 | 7.37118912 | Bradymonas sediminis | 1548548 | Bacteria | Bacteria | 329 | 6.82e-86 | NTclustered | gi|1406952946|gb|CP030032.1| | 1548548 | g81104 | i0 | 100 | 143.619791666667 | 178 | 0 | 93 | 0 | 2 | 179 | 97338 | 97161 | Bradymonas sediminis strain FA350 chromosome, complete genome | blastn | 27575 | 329 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Bradymonas | Bradymonas sediminis | |||
| 22937858 | 22937858 | PRJNA946307_P_NODE_151398_length_164_cov_2.547826_g150524_i0 | PRJNA946307 | 151398 | 164 | 2.547826 | 4.17843464 | Bacteria | 2 | Bacteria | Bacteria | 267 | 4.49e-67 | NTclustered | gi|511202453|gb|KC994684.1| | 34034 | g150524 | i0 | 98.052 | 92.109756097561 | 154 | 2 | 93 | 1 | 1 | 153 | 282 | 129 | Uncultured delta proteobacterium clone BF 004 16S ribosomal RNA gene, partial sequence | blastn | 15106 | 267 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 22938262 | 22938262 | PRJNA946307_P_NODE_35318_length_221_cov_18.406977_g34444_i0 | PRJNA946307 | 35318 | 221 | 18.406977 | 40.67941917 | Bacteria | 2 | Bacteria | Bacteria | 219 | 1.82e-52 | NTclustered | gi|354462782|gb|JN697180.1| | 34034 | g34444 | i0 | 98.387 | 59.1809954751131 | 124 | 2 | 56 | 0 | 84 | 207 | 428 | 305 | Uncultured delta proteobacterium clone OM75 16S ribosomal RNA gene, partial sequence | blastn | 13079 | 220 | 0.995454545454545 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 22938278 | 22938278 | PRJNA946307_P_NODE_37078_length_217_cov_3.773810_g36204_i0 | PRJNA946307 | 37078 | 217 | 3.77381 | 8.1891677 | root | 1 | Root_unresolved | Root_unresolved | 357 | 3.63e-94 | NTclustered | gi|306491434|gb|GU179675.1| | 34034 | g36204 | i0 | 98.515 | 94.705069124424 | 202 | 3 | 93 | 0 | 2 | 203 | 775 | 574 | Uncultured delta proteobacterium clone D009012J13 16S ribosomal RNA gene, partial sequence | blastn | 20551 | 359 | 0.994428969359331 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 24212583 | 24212583 | PRJNA946307_P_NODE_83819_length_191_cov_4.753521_g82945_i0 | PRJNA946307 | 83819 | 191 | 4.753521 | 9.07922511 | Bacteria | 2 | Bacteria | Bacteria | 315 | 1.9e-81 | NTclustered | gi|383932333|gb|JN981954.1| | 34034 | g82945 | i0 | 98.333 | 89.1047120418848 | 180 | 2 | 94 | 1 | 1 | 179 | 313 | 134 | Uncultured delta proteobacterium clone OTU-20_BFBA 16S ribosomal RNA gene, partial sequence | blastn | 17019 | 316 | 0.996835443037975 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 25153370 | 25153370 | PRJNA946307_P_NODE_40100_length_212_cov_6.668712_g39226_i0 | PRJNA946307 | 40100 | 212 | 6.668712 | 14.13766944 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 235 | 1.72e-57 | NTclustered | gi|451917203|gb|KC451067.1| | 34034 | g39226 | i0 | 87.94 | 47.8584905660377 | 199 | 24 | 94 | 0 | 13 | 211 | 89 | 287 | Uncultured delta proteobacterium clone RLBp211 16S ribosomal RNA gene, partial sequence | blastn | 10146 | 235 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;