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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA944406" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 10 ✖

tax_kingdom 1

bioproject 1

  • PRJNA944406 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2535167 2535167 PRJNA944406_P_NODE_502_length_1713_cov_3.157317_g270_i0 PRJNA944406 502 1713 3.157317 54.08484021 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 2687 0   NTclustered gi|937513727|gb|CP012850.1| 1353260 g270 i0 94.982 72.0484530064215 1714 85 100 1 1 1713 849592 847879 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 123419 2687 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
8577814 8577814 PRJNA944406_P_NODE_75987_length_248_cov_1.702857_g75028_i0 PRJNA944406 75987 248 1.702857 4.22308536 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 291 4.37e-74   NTclustered gi|937513727|gb|CP012850.1| 1353260 g75028 i0 90.783 0.875 217 20 88 0 28 244 2170817 2171033 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 217 291 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
9852658 9852658 PRJNA944406_P_NODE_50828_length_262_cov_1.629630_g49869_i0 PRJNA944406 50828 262 1.62963 4.2696306 Candidatus Nitrososphaera gargensis 497727 Archaea Archaea 154 6.37e-33   NTclustered gi|408363220|gb|CP002408.1| 1237085 g49869 i0 88.8 5.17557251908397 125 14 48 0 9 133 2729319 2729195 Candidatus Nitrososphaera gargensis Ga9.2, complete genome blastn 1356 154 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Candidatus Nitrososphaera gargensis
11128054 11128054 PRJNA944406_P_NODE_30349_length_282_cov_0.803828_g29390_i0 PRJNA944406 30349 282 0.803828 2.26679496 Candidatus Nitrosocosmicus hydrocola 1826872 Archaea Archaea 110 1.52e-19   NTclustered gi|1100598057|gb|CP017922.1| 1826872 g29390 i0 89.011 1.9822695035461 91 6 31 4 64 151 995980 996069 Candidatus Nitrosocosmicus hydrocola strain G61, complete genome blastn 559 110 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus hydrocola
17502470 17502470 PRJNA944406_P_NODE_1754_length_1061_cov_2.449393_g1135_i0 PRJNA944406 1754 1061 2.449393 25.98805973 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 1903 0   NTclustered gi|937513727|gb|CP012850.1| 1353260 g1135 i0 99.057 70.4938737040528 1061 9 100 1 1 1061 849685 848626 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 74794 1903 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
17503306 17503306 PRJNA944406_P_NODE_93574_length_244_cov_1.578947_g92615_i0 PRJNA944406 93574 244 1.578947 3.85263068 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 361 3.219999999999999e-95   NTclustered gi|937513727|gb|CP012850.1| 1353260 g92615 i0 93.416 0.995901639344262 243 16 99 0 2 244 1307723 1307965 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 243 361 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
17503343 17503343 PRJNA944406_P_NODE_97934_length_243_cov_1.623529_g96975_i0 PRJNA944406 97934 243 1.623529 3.94517547 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 340 4.169999999999999e-89   NTclustered gi|937513727|gb|CP012850.1| 1353260 g96975 i0 92.469 0.983539094650206 239 17 98 1 1 239 3047598 3047835 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 239 340 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
17836927 17836927 PRJNA944406_P_NODE_5914_length_528_cov_5.819780_g4963_i0 PRJNA944406 5914 528 5.81978 30.7284384 Nitrososphaera 497726 Archaea Archaea 710 0   NTclustered gi|300521484|gb|GU797787.1| 497727 g4963 i0 90.943 83.7897727272727 530 45 100 3 1 528 543 15 Candidatus Nitrososphaera gargensis 23S ribosomal RNA gene, partial sequence blastn 44241 710 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Candidatus Nitrososphaera gargensis
18776519 18776519 PRJNA944406_P_NODE_59295_length_254_cov_1.955801_g58336_i0 PRJNA944406 59295 254 1.955801 4.96773454 Candidatus Nitrosocosmicus arcticus 2035267 Archaea Archaea 302 2.0700000000000006e-77   NTclustered gi|1241355791|gb|KX863713.1| 2035267 g58336 i0 88.189 22.0866141732283 254 29 100 1 1 254 1679 1427 Candidatus Nitrosocosmicus arcticus 23S ribosomal RNA gene, partial sequence blastn 5610 302 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus arcticus
22601575 22601575 PRJNA944406_P_NODE_40378_length_272_cov_1.547739_g39419_i0 PRJNA944406 40378 272 1.547739 4.20985008 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 309 1.3400000000000002e-79   NTclustered gi|937513727|gb|CP012850.1| 1353260 g39419 i0 87.132 1 272 35 100 0 1 272 3054486 3054215 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 272 309 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;