RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA944406" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA944406 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7302539 7302539 PRJNA944406_P_NODE_36806_length_275_cov_2.198020_g35847_i0 PRJNA944406 36806 275 2.19802 6.044555 Candidatus Phycocordibacter aenigmaticus 1948796 Bacteria Bacteria 324 4.85e-84   NTclustered gi|2862534145|gb|CP174359.1| 1948796 g35847 i0 88.321 23.4545454545455 274 26 98 4 1 269 75398 75670 MAG: Patescibacteria group bacterium UBA2163 chromosome, complete genome blastn 6450 324 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Candidatus Phycocordibacterales Candidatus Phycocordibacteraceae Candidatus Phycocordibacter Candidatus Phycocordibacter aenigmaticus
13678188 13678188 PRJNA944406_P_NODE_39551_length_273_cov_1.325000_g38592_i0 PRJNA944406 39551 273 1.325 3.61725 Minisyncoccota bacterium 2053589 Bacteria Bacteria 159 1.4399999999999999e-34   NTclustered gi|2556886971|gb|CP129473.1| 2053589 g38592 i0 81.726 4.88644688644689 197 30 71 6 16 209 443304 443111 MAG: Candidatus Paceibacterota bacterium isolate cMAG.23 chromosome, complete genome blastn 1334 159 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;