RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA944406" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA944406 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1259305 1259305 PRJNA944406_P_NODE_11981_length_363_cov_2.124138_g11022_i0 PRJNA944406 11981 363 2.124138 7.71062094 Pseudomonadati 3379134 Bacteria Bacteria 542 1.6799999999999999e-149   NTclustered gi|1938788434|gb|CP054181.1| 2053306 g11022 i0 93.664 510.699724517906 363 21 100 2 1 363 1603038 1602678 Ignavibacteria bacterium isolate H1_BAC2 chromosome blastn 185384 542 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
11463319 11463319 PRJNA944406_P_NODE_59569_length_254_cov_1.701657_g58610_i0 PRJNA944406 59569 254 1.701657 4.32220878 Pseudomonadati 3379134 Bacteria Bacteria 228 3.569999999999999e-55   NTclustered gi|1938788434|gb|CP054181.1| 2053306 g58610 i0 83.333 78.7834645669291 258 32 99 8 1 252 1603202 1603454 Ignavibacteria bacterium isolate H1_BAC2 chromosome blastn 20011 228 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
18776723 18776723 PRJNA944406_P_NODE_78095_length_248_cov_0.880000_g77136_i0 PRJNA944406 78095 248 0.88 2.1824 Ignavibacteria bacterium 2053306 Bacteria Bacteria 172 1.6499999999999999e-38   NTclustered gi|1858604176|gb|CP054675.1| 2053306 g77136 i0 88.276 3.19758064516129 145 16 58 1 6 149 872997 873141 Ignavibacteria bacterium isolate Ch128a chromosome, complete genome blastn 793 172 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;