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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA944406" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA944406 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
924230 924230 PRJNA944406_P_NODE_16521_length_318_cov_1.346939_g15562_i0 PRJNA944406 16521 318 1.346939 4.28326602 uncultured Fibrobacteria bacterium 1758207 Bacteria Bacteria 399 9.239999999999998e-107   NTclustered gi|2874253984|emb|OY970309.1| 1758207 g15562 i0 89.557 333.874213836478 316 32 99 1 4 318 1596898 1596583 MAG: uncultured Fibrobacteria bacterium isolate MFD05502.bin.1.3 genome assembly, chromosome: 1 blastn 106172 399 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       uncultured Fibrobacteria bacterium
3475773 3475773 PRJNA944406_P_NODE_9123_length_412_cov_1.410029_g8164_i0 PRJNA944406 9123 412 1.410029 5.80931948 uncultured Fibrobacteria bacterium 1758207 Bacteria Bacteria 494 5.47e-135   NTclustered gi|2874253984|emb|OY970309.1| 1758207 g8164 i0 88.221 229.958737864078 416 45 100 3 1 412 1594430 1594015 MAG: uncultured Fibrobacteria bacterium isolate MFD05502.bin.1.3 genome assembly, chromosome: 1 blastn 94743 494 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       uncultured Fibrobacteria bacterium
16227677 16227677 PRJNA944406_P_NODE_60113_length_253_cov_3.422222_g59154_i0 PRJNA944406 60113 253 3.422222 8.65822166 uncultured Fibrobacteria bacterium 1758207 Bacteria Bacteria 294 3.45e-75   NTclustered gi|2874253984|emb|OY970309.1| 1758207 g59154 i0 87.795 297.541501976285 254 28 99 3 2 253 1593963 1594215 MAG: uncultured Fibrobacteria bacterium isolate MFD05502.bin.1.3 genome assembly, chromosome: 1 blastn 75278 294 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       uncultured Fibrobacteria bacterium
16227813 16227813 PRJNA944406_P_NODE_7433_length_461_cov_1.801546_g6477_i0 PRJNA944406 7433 461 1.801546 8.30512706 uncultured Fibrobacteria bacterium 1758207 Bacteria Bacteria 377 6.499999999999999e-100   NTclustered gi|2874253984|emb|OY970309.1| 1758207 g6477 i0 81.974 104.119305856833 466 65 99 17 1 455 1593960 1594417 MAG: uncultured Fibrobacteria bacterium isolate MFD05502.bin.1.3 genome assembly, chromosome: 1 blastn 47999 377 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       uncultured Fibrobacteria bacterium
22601916 22601916 PRJNA944406_P_NODE_6838_length_484_cov_1.656934_g5882_i0 PRJNA944406 6838 484 1.656934 8.01956056 uncultured Fibrobacteria bacterium 1758207 Bacteria Bacteria 569 1.0499999999999997e-157   NTclustered gi|2874253984|emb|OY970309.1| 1758207 g5882 i0 87.91 99.4235537190083 488 53 100 6 1 484 1595798 1595313 MAG: uncultured Fibrobacteria bacterium isolate MFD05502.bin.1.3 genome assembly, chromosome: 1 blastn 48121 569 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       uncultured Fibrobacteria bacterium
25150475 25150475 PRJNA944406_P_NODE_16860_length_315_cov_4.252066_g15901_i0 PRJNA944406 16860 315 4.252066 13.3940079 uncultured Fibrobacteria bacterium 1758207 Bacteria Bacteria 357 5.58e-94   NTclustered gi|2874253984|emb|OY970309.1| 1758207 g15901 i0 88.814 154.015873015873 295 28 93 5 1 293 1595126 1594835 MAG: uncultured Fibrobacteria bacterium isolate MFD05502.bin.1.3 genome assembly, chromosome: 1 blastn 48515 357 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       uncultured Fibrobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;