RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA944406" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA944406 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2199998 2199998 PRJNA944406_P_NODE_49422_length_264_cov_1.094241_g48463_i0 PRJNA944406 49422 264 1.094241 2.88879624 Rozella sp. 1932610 Fungi Fungi 213 1.05e-50   NTclustered gi|2468791040|gb|OQ702927.1| 1932610 g48463 i0 81.783 91.4393939393939 258 43 97 4 2 258 4227 4481 Rozella sp. isolate PSC259 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 24140 213 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella sp.
3475099 3475099 PRJNA944406_P_NODE_2563_length_863_cov_4.268354_g1793_i0 PRJNA944406 2563 863 4.268354 36.83589502 Rozella sp. 1932610 Fungi Fungi 178 1.38e-39   NTclustered gi|2468791040|gb|OQ702927.1| 1932610 g1793 i0 94.068 15.8945538818076 118 5 24 2 698 814 4356 4472 Rozella sp. isolate PSC259 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13717 178 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella sp.
23877535 23877535 PRJNA944406_P_NODE_7639_length_454_cov_3.650919_g6683_i0 PRJNA944406 7639 454 3.650919 16.57517226 uncultured Cryptomycota 1130064 Fungi Fungi 237 1.13e-57   NTclustered gi|2086101624|gb|MZ923185.1| 1130064 g6683 i0 77.189 67.0462555066079 434 82 93 13 2 421 695 265 Uncultured Cryptomycota clone UMPB-1161 small subunit ribosomal RNA gene, partial sequence blastn 30439 237 1 Eukaryota Opisthokonta Fungi Cryptomycota         uncultured Cryptomycota

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;