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contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJNA944406" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 30 ✖

tax_clade 1

bioproject 1

  • PRJNA944406 · 30 ✖

analysis 1

  • blastn · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
924578 924578 PRJNA944406_P_NODE_46201_length_267_cov_1.185567_g45242_i0 PRJNA944406 46201 267 1.185567 3.16546389 Platyophryides magnus 1003332 SAR_Eukaryotes SAR_Eukaryotes 425 1.25e-114   NTclustered gi|328684914|gb|HM122030.1| 1003332 g45242 i0 95.539 95.876404494382 269 7 100 5 1 267 323 58 Platyophryides magnus isolate SNK09112401 macronuclear blastn 25599 425 1 Eukaryota Sar   Ciliophora Colpodea Cyrtolophosidida Platyophryidae Platyophryides Platyophryides magnus
3474925 3474925 PRJNA944406_P_NODE_111743_length_233_cov_3.481250_g110784_i0 PRJNA944406 111743 233 3.48125 8.1113125 Opisthonecta sp. FG-2015 1607889 SAR_Eukaryotes SAR_Eukaryotes 385 1.81e-102   NTclustered gi|759083562|gb|KM222179.1| 1607889 g110784 i0 96.552 99.31330472103 232 8 99 0 2 233 1435 1204 Opisthonecta sp. FG-2015 voucher SZ2011052301 large subunit ribosomal RNA gene, partial sequence blastn 23140 385 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Opisthonectidae Opisthonecta Opisthonecta sp. FG-2015
3811419 3811419 PRJNA944406_P_NODE_22343_length_289_cov_1.833333_g21384_i0 PRJNA944406 22343 289 1.833333 5.29833237 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 228 4.139999999999999e-55   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g21384 i0 96.377 1.43252595155709 138 5 48 0 152 289 3082 2945 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 414 228 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
4753340 4753340 PRJNA944406_P_NODE_78344_length_248_cov_0.880000_g77385_i0 PRJNA944406 78344 248 0.88 2.1824 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 58.4 4.82e-4   NTclustered gi|829182036|ref|XM_001020432.3| 312017 g77385 i0 100 0.125 31 0 13 0 190 220 2324 2354 Tetrahymena thermophila SB210 translation initiation factor eIF-5A family protein partial mRNA blastn 31 58.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
6028269 6028269 PRJNA944406_P_NODE_91525_length_245_cov_0.895349_g90566_i0 PRJNA944406 91525 245 0.895349 2.19360505 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|145513689|ref|XM_001442719.1| 5888 g90566 i0 100 0.118367346938776 29 0 12 0 175 203 406 434 Paramecium tetraurelia uncharacterized protein (GSPATT00001563001), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
8577762 8577762 PRJNA944406_P_NODE_7107_length_474_cov_1.037406_g6151_i0 PRJNA944406 7107 474 1.037406 4.91730444 Opercularia sp. ZhW-2019a 2582953 SAR_Eukaryotes SAR_Eukaryotes 848 0   NTclustered gi|2304601486|gb|OP458307.1| 2582953 g6151 i0 98.945 84.4367088607595 474 5 100 0 1 474 39 512 Opercularia sp. ZhW-2019a large subunit ribosomal RNA gene, partial sequence blastn 40023 848 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Operculariidae Opercularia Opercularia sp. ZhW-2019a
9852193 9852193 PRJNA944406_P_NODE_111628_length_234_cov_2.596273_g110669_i0 PRJNA944406 111628 234 2.596273 6.07527882 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 348 2.3900000000000001e-91   NTclustered gi|2651357788|gb|PP174303.1| 41631 g110669 i0 93.59 87.6111111111111 234 14 100 1 1 234 3550 3782 Colpoda sp. isolate CIL1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20501 348 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
9852285 9852285 PRJNA944406_P_NODE_18648_length_304_cov_2.000000_g17689_i0 PRJNA944406 18648 304 2 6.08 uncultured Peritrichia 282477 SAR_Eukaryotes SAR_Eukaryotes 540 4.96e-149   NTclustered gi|1151071396|gb|KX926073.1| 282477 g17689 i0 98.684 99.3519736842105 304 4 100 0 1 304 1298 995 Uncultured Peritrichia clone Peri974F_W_45 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 30203 540 1 Eukaryota Sar   Ciliophora Oligohymenophorea       uncultured Peritrichia
9852834 9852834 PRJNA944406_P_NODE_67728_length_250_cov_1.305085_g66769_i0 PRJNA944406 67728 250 1.305085 3.2627125 Foissnerides sp. 2023693 SAR_Eukaryotes SAR_Eukaryotes 457 4.1099999999999985e-124   NTclustered gi|1226859311|gb|MF474354.1| 2023693 g66769 i0 99.6 46.544 250 1 100 0 1 250 1682 1433 Foissnerides sp. isolate PHB10032106 large subunit ribosomal RNA gene, partial sequence blastn 11636 457 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida Trachelophyllidae Foissnerides Foissnerides sp.
9853055 9853055 PRJNA944406_P_NODE_9128_length_412_cov_1.268437_g8169_i0 PRJNA944406 9128 412 1.268437 5.22596044 Rhabdostyla commensalis 2652865 SAR_Eukaryotes SAR_Eukaryotes 745 0   NTclustered gi|1758147872|gb|MN543651.1| 2652865 g8169 i0 99.272 99.9805825242718 412 3 100 0 1 412 872 461 Rhabdostyla commensalis isolate LBR2017090403 small subunit ribosomal RNA gene, partial sequence blastn 41192 745 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Epistylidae Rhabdostyla Rhabdostyla commensalis
9853109 9853109 PRJNA944406_P_NODE_96608_length_244_cov_0.900585_g95649_i0 PRJNA944406 96608 244 0.900585 2.1974274 Strombidium stylifer 356896 SAR_Eukaryotes SAR_Eukaryotes 91.6 4.66e-14   NTclustered gi|751667003|gb|KJ609058.1| 356896 g95649 i0 78.767 5.80327868852459 146 24 59 7 1 145 1505 1366 Strombidium stylifer voucher LWW08033005 large subunit ribosomal RNA gene, partial sequence blastn 1416 91.6 1 Eukaryota Sar   Ciliophora Spirotrichea   Strombidiidae Strombidium Strombidium stylifer
11127881 11127881 PRJNA944406_P_NODE_17409_length_311_cov_1.588235_g16450_i0 PRJNA944406 17409 311 1.588235 4.93941085 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 497 3.11e-136   NTclustered gi|2651357791|gb|PP174306.1| 41631 g16450 i0 95.498 93.3376205787781 311 14 100 0 1 311 3698 3388 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 29028 497 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
11128157 11128157 PRJNA944406_P_NODE_39149_length_273_cov_1.540000_g38190_i0 PRJNA944406 39149 273 1.54 4.2042 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 174 5.13e-39   NTclustered gi|217404|dbj|D10521.1|TETCALW 5908 g38190 i0 84.358 12.7289377289377 179 26 65 2 1 178 276 453 Tetrahymena pyriformis mRNA for calmodulin, complete cds blastn 3475 174 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
12403339 12403339 PRJNA944406_P_NODE_111770_length_233_cov_2.843750_g110811_i0 PRJNA944406 111770 233 2.84375 6.6259375 Gastrocirrhus monilifer 402891 SAR_Eukaryotes SAR_Eukaryotes 185 1.9699999999999998e-42   NTclustered gi|759083525|gb|KM222142.1| 402891 g110811 i0 81.933 63.618025751073 238 25 99 11 2 233 1184 959 Gastrocirrhus monilifer voucher CXM08100701 large subunit ribosomal RNA gene, partial sequence blastn 14823 185 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Gastrocirrhidae Gastrocirrhus Gastrocirrhus monilifer
12403725 12403725 PRJNA944406_P_NODE_45130_length_268_cov_1.107692_g44171_i0 PRJNA944406 45130 268 1.107692 2.96861456 uncultured Uronychia sp. 2487777 SAR_Eukaryotes SAR_Eukaryotes 418 2.1e-112   NTclustered gi|1516250919|gb|MK177620.1| 2487777 g44171 i0 95.094 99.660447761194 265 13 99 0 1 265 129 393 Uncultured Uronychia sp. clone DDI141.fa small subunit ribosomal RNA gene, partial sequence blastn 26709 418 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida     uncultured Uronychia sp.
12403874 12403874 PRJNA944406_P_NODE_57990_length_256_cov_0.918033_g57031_i0 PRJNA944406 57990 256 0.918033 2.35016448 Dasytricha ruminantium 40806 SAR_Eukaryotes SAR_Eukaryotes 327 3.45e-85   NTclustered gi|92790147|emb|AJ965259.1| 40806 g57031 i0 89.804 199.359375 255 26 99 0 2 256 921 667 Dasytricha ruminantium partial mRNA for Polyubiqutin 3 (polyubiqutin 3 gene) blastn 51036 327 1 Eukaryota Sar   Ciliophora Litostomatea Vestibuliferida Isotrichidae Dasytricha Dasytricha ruminantium
12738688 12738688 PRJNA944406_P_NODE_10810_length_379_cov_4.003268_g9851_i0 PRJNA944406 10810 379 4.003268 15.17238572 Colpodidae 5978 SAR_Eukaryotes SAR_Eukaryotes 678 0   NTclustered gi|1802599797|gb|MT001206.1| 41631 g9851 i0 98.945 99.0791556728232 379 4 100 0 1 379 898 520 Colpoda sp. strain HFCC1227 small subunit ribosomal RNA gene, partial sequence blastn 37551 678 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
12738746 12738746 PRJNA944406_P_NODE_17810_length_310_cov_1.354430_g16851_i0 PRJNA944406 17810 310 1.35443 4.198733 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 529 1.0999999999999996e-145   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g16851 i0 97.419 99.6193548387097 310 8 100 0 1 310 962 1271 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 30882 529 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
13678141 13678141 PRJNA944406_P_NODE_35111_length_277_cov_1.509804_g34152_i0 PRJNA944406 35111 277 1.509804 4.18215708 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 209 1.43e-49   NTclustered gi|217404|dbj|D10521.1|TETCALW 5908 g34152 i0 80.97 46.4981949458484 268 47 96 4 8 273 466 201 Tetrahymena pyriformis mRNA for calmodulin, complete cds blastn 12880 209 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
14952480 14952480 PRJNA944406_P_NODE_43112_length_269_cov_2.413265_g42153_i0 PRJNA944406 43112 269 2.413265 6.49168285 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 215 2.97e-51   NTclustered gi|829174258|ref|XM_001017628.3| 312017 g42153 i0 81.25 46.9368029739777 272 45 100 6 1 269 821 1089 Tetrahymena thermophila SB210 vacuolar H+-ATPase A subunit partial mRNA blastn 12626 215 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
16561876 16561876 PRJNA944406_P_NODE_11433_length_370_cov_2.016835_g10474_i0 PRJNA944406 11433 370 2.016835 7.4622895 Isotricha 5986 SAR_Eukaryotes SAR_Eukaryotes 189 2.5699999999999993e-43   NTclustered gi|2643596954|gb|PP067626.1| 5987 g10474 i0 98.148 29.3054054054054 108 2 29 0 263 370 3732 3839 Isotricha prostoma isolate 03.MDA03 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 10843 189 1 Eukaryota Sar   Ciliophora Litostomatea Vestibuliferida Isotrichidae Isotricha Isotricha prostoma
16561897 16561897 PRJNA944406_P_NODE_14793_length_333_cov_1.730769_g13834_i0 PRJNA944406 14793 333 1.730769 5.76346077 Spirotrichea 33829 SAR_Eukaryotes SAR_Eukaryotes 95.3 5.14e-15   NTclustered gi|1870154484|gb|MT764262.1| 211013 g13834 i0 88.462 9.0960960960961 78 9 23 0 256 333 1234 1157 Tintinnopsis tocantinensis large subunit ribosomal RNA gene, partial sequence blastn 3029 95.3 1 Eukaryota Sar   Ciliophora Spirotrichea Tintinnida Codonellidae Tintinnopsis Tintinnopsis tocantinensis
18775932 18775932 PRJNA944406_P_NODE_111495_length_235_cov_2.419753_g110536_i0 PRJNA944406 111495 235 2.419753 5.68641955 Leptopharynx costatus 502090 SAR_Eukaryotes SAR_Eukaryotes 390 3.93e-104   NTclustered gi|558697263|gb|KC832958.1| 502090 g110536 i0 96.596 66.463829787234 235 8 100 0 1 235 38 272 Leptopharynx costatus 28S ribosomal RNA gene, partial sequence blastn 15619 390 1 Eukaryota Sar   Ciliophora Nassophorea Microthoracida Microthoracidae Leptopharynx Leptopharynx costatus
19110795 19110795 PRJNA944406_P_NODE_31455_length_280_cov_2.879227_g30496_i0 PRJNA944406 31455 280 2.879227 8.0618356 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 496 9.92e-136   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g30496 i0 98.571 92.7928571428571 280 4 100 0 1 280 1260 981 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 25982 496 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
20385648 20385648 PRJNA944406_P_NODE_16596_length_317_cov_3.918033_g15637_i0 PRJNA944406 16596 317 3.918033 12.42016461 Colpoda 5979 SAR_Eukaryotes SAR_Eukaryotes 586 6.579999999999998e-163   NTclustered gi|646281696|gb|KJ607914.1| 63136 g15637 i0 100 98.7160883280757 317 0 100 0 1 317 15 331 Colpoda steinii strain PABBc-11 18S ribosomal RNA gene, partial sequence blastn 31293 586 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda steini
20385916 20385916 PRJNA944406_P_NODE_9836_length_397_cov_1.608025_g8877_i0 PRJNA944406 9836 397 1.608025 6.38385925 root 1 Root_unresolved Root_unresolved 54.7 0.011   NTclustered gi|342161092|gb|JF694057.1| 132687 g8877 i0 100 0.438287153652393 29 0 7 0 100 128 1568 1596 Diophrys appendiculata voucher WYG-06052401 28S ribosomal RNA gene, partial sequence blastn 174 54.7 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Uronychiidae Diophrys Diophrys appendiculata
23877339 23877339 PRJNA944406_P_NODE_5919_length_528_cov_1.353846_g4968_i0 PRJNA944406 5919 528 1.353846 7.14830688 Hypotrichida sp. AL 196105 SAR_Eukaryotes SAR_Eukaryotes 381 5.819999999999998e-101   NTclustered gi|21215217|gb|AF510210.1| 196105 g4968 i0 81.425 79.8636363636364 463 84 88 2 5 466 627 166 Hypotrichida sp. AL beta-tubulin gene, complete cds blastn 42168 381 1 Eukaryota Sar   Ciliophora Spirotrichea       Hypotrichida sp. AL
23877388 23877388 PRJNA944406_P_NODE_6299_length_510_cov_3.073227_g5344_i0 PRJNA944406 6299 510 3.073227 15.6734577 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 885 0   NTclustered gi|2651357791|gb|PP174306.1| 41631 g5344 i0 98.039 72.8470588235294 510 9 100 1 1 510 3354 3862 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 37152 885 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
25150414 25150414 PRJNA944406_P_NODE_112620_length_229_cov_2.012821_g111661_i0 PRJNA944406 112620 229 2.012821 4.60936009 Cyclidium glaucoma 35100 SAR_Eukaryotes SAR_Eukaryotes 424 3.76e-114   NTclustered gi|90657149|gb|DQ442807.1| 35100 g111661 i0 100 96.703056768559 229 0 100 0 1 229 157 385 Cyclidium glaucoma isolate ES31 28S ribosomal RNA gene, partial sequence blastn 22145 424 1 Eukaryota Sar   Ciliophora Oligohymenophorea Pleuronematida Cyclidiidae Cyclidium Cyclidium glaucoma
25486082 25486082 PRJNA944406_P_NODE_53180_length_260_cov_1.647059_g52221_i0 PRJNA944406 53180 260 1.647059 4.2823534 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 442 1.1999999999999999e-119   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g52221 i0 97.308 9.13076923076923 260 7 100 0 1 260 1831 1572 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 2374 442 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;