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contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA944406" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 21 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA944406 · 21 ✖

analysis 1

  • blastn · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4752716 4752716 PRJNA944406_P_NODE_2364_length_906_cov_20.729892_g1623_i0 PRJNA944406 2364 906 20.729892 187.81282152 Lobulomycetales sp. 2058121 Fungi Fungi 488 5.8799999999999985e-133   NTclustered gi|2468790865|gb|OQ702874.1| 2058121 g1623 i0 79.692 78.9470198675497 714 116 78 25 1 704 3712 4406 Lobulomycetales sp. isolate PSC090 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 71526 488 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Lobulomycetales     Lobulomycetales sp.
5087590 5087590 PRJNA944406_P_NODE_101544_length_243_cov_0.864706_g100585_i0 PRJNA944406 101544 243 0.864706 2.10123558 Endochytrium 109937 Fungi Fungi 183 7.44e-42   NTclustered gi|1866582723|gb|MT730898.1| 2011712 g100585 i0 80.952 79.1399176954732 231 44 95 0 1 231 3822 4052 Cladochytriales sp. isolate JEL0931 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19231 183 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales     Cladochytriales sp.
7302243 7302243 PRJNA944406_P_NODE_112646_length_228_cov_2.980645_g111687_i0 PRJNA944406 112646 228 2.980645 6.7958706 uncultured Chytridiomycota 175247 Fungi Fungi 405 1.35e-108   NTclustered gi|20377940|gb|AF372720.1| 175247 g111687 i0 98.69 100.043859649123 229 1 100 2 1 228 600 373 Uncultured chytrid clone LEMD195 small subunit ribosomal RNA gene, partial sequence blastn 22810 405 1 Eukaryota Opisthokonta Fungi Chytridiomycota         uncultured Chytridiomycota
7302996 7302996 PRJNA944406_P_NODE_77966_length_248_cov_0.880000_g77007_i0 PRJNA944406 77966 248 0.88 2.1824 Rhizophlyctis rosea 64517 Fungi Fungi 459 1.13e-124   NTclustered gi|1866582754|gb|MT730929.1| 64517 g77007 i0 100 100.088709677419 248 0 100 0 1 248 4354 4107 Rhizophlyctis rosea isolate KP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 24822 459 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
8577195 8577195 PRJNA944406_P_NODE_18607_length_304_cov_9.138528_g17648_i0 PRJNA944406 18607 304 9.138528 27.78112512 Spizellomyces punctatus 109760 Fungi Fungi 255 2.01e-63   NTclustered gi|1027029543|ref|XR_001677161.1| 645134 g17648 i0 92.308 48.1315789473684 182 11 59 3 1 179 3904 4085 Spizellomyces punctatus DAOM BR117 28S ribosomal RNA (SPPG_11002), rRNA blastn 14632 255 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
8577330 8577330 PRJNA944406_P_NODE_30667_length_281_cov_1.480769_g29708_i0 PRJNA944406 30667 281 1.480769 4.16096089 Polychytrium aggregatum 110093 Fungi Fungi 111 4.21e-20   NTclustered gi|2432157234|ref|XM_053105876.1| 110093 g29708 i0 76.961 0.939501779359431 204 41 71 6 35 234 401 200 Polychytrium aggregatum centrin 1 (BJ171DRAFT_161795), mRNA blastn 264 111 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
8577918 8577918 PRJNA944406_P_NODE_88447_length_245_cov_3.284884_g87488_i0 PRJNA944406 88447 245 3.284884 8.0479658 Rhizophydium sp. JEL317 281835 Fungi Fungi 412 8.81e-111   NTclustered gi|82398226|gb|DQ273779.1| 281835 g87488 i0 97.131 137.016326530612 244 7 99 0 1 244 2382 2625 Rhizophydium sp. JEL317 isolate AFTOL-ID 35 28S ribosomal RNA gene, partial sequence blastn 33569 412 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Rhizophydiaceae Rhizophydium Rhizophydium sp. JEL317
9852911 9852911 PRJNA944406_P_NODE_7588_length_456_cov_1.281984_g6632_i0 PRJNA944406 7588 456 1.281984 5.84584704 Dendrochytridium crassum 1352835 Fungi Fungi 124 9.24e-24   NTclustered gi|82398285|gb|DQ273785.1| 1352835 g6632 i0 86.957 5.93640350877193 115 10 25 5 344 456 1848 1959 Dendrochytridium crassum isolate AFTOL-ID 41 28S ribosomal RNA gene, partial sequence blastn 2707 124 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Dendrochytridium Dendrochytridium crassum
10188062 10188062 PRJNA944406_P_NODE_14868_length_332_cov_6.401544_g13909_i0 PRJNA944406 14868 332 6.401544 21.25312608 Powellomycetaceae 1134080 Fungi Fungi 612 1.14e-170   NTclustered gi|1866582454|gb|MT730629.1| 109894 g13909 i0 100 99.7319277108434 331 0 99 0 2 332 4505 4175 Geranomyces variabilis isolate Barr350 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 33111 612 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Geranomyces Geranomyces variabilis
11127824 11127824 PRJNA944406_P_NODE_12229_length_360_cov_5.184669_g11270_i0 PRJNA944406 12229 360 5.184669 18.6648084 uncultured Rhizophydiales 687209 Fungi Fungi 651 0   NTclustered gi|1666220530|gb|MH643793.1| 687209 g11270 i0 99.441 99.6194444444444 358 2 99 0 3 360 5242 5599 Uncultured Rhizophydiales isolate SkChyt5 18S ribosomal RNA gene, partial sequence; putative homing endonuclease gene, complete cds; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 35863 651 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales     uncultured Rhizophydiales
12738891 12738891 PRJNA944406_P_NODE_54990_length_258_cov_2.221622_g54031_i0 PRJNA944406 54990 258 2.221622 5.73178476 Gonapodya 109944 Fungi Fungi 158 4.84e-34   NTclustered gi|675391974|gb|KJ668088.1| 109955 g54031 i0 78.629 58.7325581395349 248 45 95 8 1 246 1462 1703 Gonapodya sp. JEL183 28S ribosomal RNA gene, partial sequence blastn 15153 158 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales Gonapodyaceae Gonapodya Gonapodya sp. JEL183
14013316 14013316 PRJNA944406_P_NODE_14371_length_337_cov_1.727273_g13412_i0 PRJNA944406 14371 337 1.727273 5.82091001 Eukaryota 2759 Fungi Fungi 568 2.5499999999999993e-157   NTclustered gi|1933067189|dbj|LC435131.1| 687209 g13412 i0 97.033 100.13649851632 337 10 100 0 1 337 1545 1209 Uncultured Rhizophydiales 711o13Ag gene for 18S ribosomal RNA, partial sequence blastn 33746 568 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales     uncultured Rhizophydiales
14013429 14013429 PRJNA944406_P_NODE_46551_length_266_cov_1.678756_g45592_i0 PRJNA944406 46551 266 1.678756 4.46549096 Eukaryota 2759 Fungi Fungi 239 1.74e-58   NTclustered gi|262235134|gb|GQ995345.1| 175247 g45592 i0 83.15 101.199248120301 273 34 100 10 1 266 602 869 Uncultured Chytridiomycota clone T6P2AeA08 18S ribosomal RNA gene, partial sequence blastn 26919 239 1 Eukaryota Opisthokonta Fungi Chytridiomycota         uncultured Chytridiomycota
14952184 14952184 PRJNA944406_P_NODE_15052_length_331_cov_1.193798_g14093_i0 PRJNA944406 15052 331 1.193798 3.95147138 uncultured Chytridiales 282511 Fungi Fungi 104 8.48e-18   NTclustered gi|665900105|dbj|AB971026.1| 282511 g14093 i0 92 22.0271903323263 75 4 23 2 99 173 497 569 Uncultured Chytridiales gene for 18S ribosomal RNA, partial sequence, clone: Jp13Ch02E blastn 7291 104 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales     uncultured Chytridiales
14952635 14952635 PRJNA944406_P_NODE_57012_length_256_cov_2.524590_g56053_i0 PRJNA944406 57012 256 2.52459 6.4629504 Lobulomycetales sp. 2058121 Fungi Fungi 335 2.0599999999999993e-87   NTclustered gi|2468790865|gb|OQ702874.1| 2058121 g56053 i0 90.234 92.40234375 256 25 100 0 1 256 4298 4043 Lobulomycetales sp. isolate PSC090 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 23655 335 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Lobulomycetales     Lobulomycetales sp.
16227373 16227373 PRJNA944406_P_NODE_32893_length_279_cov_1.495146_g31934_i0 PRJNA944406 32893 279 1.495146 4.17145734 Zygophlyctis sp. 3036231 Fungi Fungi 505 1.6399999999999995e-138   NTclustered gi|2468790888|gb|OQ702882.1| 3036231 g31934 i0 99.283 100.200716845878 279 2 100 0 1 279 3970 4248 Zygophlyctis sp. isolate PSC140 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 27956 505 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Zygophlyctidales Zygophlyctidaceae Zygophlyctis Zygophlyctis sp.
21326405 21326405 PRJNA944406_P_NODE_19437_length_298_cov_2.662222_g18478_i0 PRJNA944406 19437 298 2.662222 7.93342156 uncultured Rhizophydiales 687209 Fungi Fungi 518 2.2699999999999998e-142   NTclustered gi|1666220530|gb|MH643793.1| 687209 g18478 i0 97.987 104.677852348993 298 6 100 0 1 298 6125 6422 Uncultured Rhizophydiales isolate SkChyt5 18S ribosomal RNA gene, partial sequence; putative homing endonuclease gene, complete cds; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 31194 518 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales     uncultured Rhizophydiales
21327212 21327212 PRJNA944406_P_NODE_93217_length_244_cov_1.801170_g92258_i0 PRJNA944406 93217 244 1.80117 4.3948548 Rhizoclosmatium pessaminum 2498549 Fungi Fungi 110 1.29e-19   NTclustered gi|1866582674|gb|MT730849.1| 2498549 g92258 i0 77.143 57.6147540983607 210 34 84 13 38 243 4707 4508 Rhizoclosmatium pessaminum isolate JEL0849 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14058 110 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Rhizoclosmatium Rhizoclosmatium pessaminum
21661565 21661565 PRJNA944406_P_NODE_109277_length_241_cov_0.916667_g108318_i0 PRJNA944406 109277 241 0.916667 2.20916747 Monoblepharidaceae 79273 Fungi Fungi 224 4.3399999999999996e-54   NTclustered gi|311235629|ref|NG_027646.1| 82268 g108318 i0 89.503 103.01244813278 181 14 74 5 63 241 1644 1467 Hyaloraphidium curvatum SAG 235-1 28S rRNA gene, partial sequence; from reference material blastn 24826 226 0.991150442477876 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
25150433 25150433 PRJNA944406_P_NODE_12180_length_361_cov_1.538194_g11221_i0 PRJNA944406 12180 361 1.538194 5.55288034 Rhizophydiales sp. 2011922 Fungi Fungi 634 2.6699999999999993e-177   NTclustered gi|2468790984|gb|OQ702913.1| 2011922 g11221 i0 98.343 100.321329639889 362 5 100 1 1 361 4238 3877 Rhizophydiales sp. isolate PSC219 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 36216 634 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales     Rhizophydiales sp.
25151297 25151297 PRJNA944406_P_NODE_9500_length_403_cov_2.218182_g8541_i0 PRJNA944406 9500 403 2.218182 8.93927346 Synchytrium microbalum 1806994 Fungi Fungi 191 7.85e-44   NTclustered gi|1759146603|ref|XM_031168002.1| 1806994 g8541 i0 79.061 50.3101736972705 277 58 69 0 127 403 1321 1045 Synchytrium microbalum uncharacterized protein (SmJEL517_g02074), partial mRNA blastn 20275 191 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;