RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA944406" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA944406 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6027278 6027278 PRJNA944406_P_NODE_104705_length_242_cov_0.911243_g103746_i0 PRJNA944406 104705 242 0.911243 2.20520806 uncultured Candidatus Binatia bacterium 3036252 Bacteria Bacteria 287 5.49e-73   NTclustered gi|2546137839|emb|OY282432.1| 3036252 g103746 i0 88.017 182.900826446281 242 29 100 0 1 242 2261060 2261301 MAG: uncultured Candidatus Binatia bacterium isolate 81991fb1-66cf-4eb3-b653-309a223604dd genome assembly, chromosome: 1 blastn 44262 287 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       uncultured Candidatus Binatia bacterium
14952193 14952193 PRJNA944406_P_NODE_15652_length_325_cov_2.170635_g14693_i0 PRJNA944406 15652 325 2.170635 7.05456375 uncultured Candidatus Binatia bacterium 3036252 Bacteria Bacteria 300 9.88e-77   NTclustered gi|2893356064|emb|OZ220487.1| 3036252 g14693 i0 83.742 194.246153846154 326 43 99 8 3 325 5537260 5536942 MAG: uncultured Candidatus Binatia bacterium isolate d2d8104a-f810-4fb4-bb0c-dc82b69497ba genome assembly, chromosome: 1 blastn 63130 300 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       uncultured Candidatus Binatia bacterium
20050875 20050875 PRJNA944406_P_NODE_15596_length_326_cov_1.090909_g14637_i0 PRJNA944406 15596 326 1.090909 3.55636334 uncultured Candidatus Binatia bacterium 3036252 Bacteria Bacteria 183 1.04e-41   NTclustered gi|2891481979|emb|OZ219754.1| 3036252 g14637 i0 86.747 94.3803680981595 166 20 51 2 107 271 2070313 2070477 MAG: uncultured Candidatus Binatia bacterium isolate 58a26a4a-5c73-4e1d-804e-87f8126ae6b7 genome assembly, chromosome: 1 blastn 30768 183 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       uncultured Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;