RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA944406" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 5 ✖

bioproject 1

  • PRJNA944406 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3475676 3475676 PRJNA944406_P_NODE_8003_length_443_cov_0.848649_g7046_i0 PRJNA944406 8003 443 0.848649 3.75951507 Erythrocytic necrosis virus 1543320 Viruses Viruses 728 0   NTclustered gi|1624806635|gb|MK638688.1| 1543320 g7046 i0 96.599 6.79232505643341 441 12 99 1 2 439 1 441 Erythrocytic necrosis virus isolate SEQ_16 hypothetical protein mRNA, partial cds blastn 3009 728 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
6363531 6363531 PRJNA944406_P_NODE_5385_length_558_cov_0.909278_g4440_i0 PRJNA944406 5385 558 0.909278 5.07377124 root 1 Root_unresolved Root_unresolved 1026 0   NTclustered gi|2288721861|gb|OP218818.1| 10535 g4440 i0 99.821 100.612903225806 558 1 100 0 1 558 2282 1725 Unidentified adenovirus strain CHOP Ad5 blastn 56142 1026 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
11463146 11463146 PRJNA944406_P_NODE_13029_length_351_cov_1.906475_g12070_i0 PRJNA944406 13029 351 1.906475 6.69172725 root 1 Root_unresolved Root_unresolved 649 0   NTclustered gi|2616465679|gb|OR735196.1| 10515 g12070 i0 100 100 351 0 100 0 1 351 3945 3595 Human adenovirus 2 isolate HAdV-C2/USA/11A6/2013, complete genome blastn 35100 649 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
14952092 14952092 PRJNA944406_P_NODE_108932_length_241_cov_0.916667_g107973_i0 PRJNA944406 108932 241 0.916667 2.20916747 Alphaorpheovirus massiliense 3426221 Viruses Viruses 58.4 4.66e-4   NTclustered gi|1315688781|emb|LT906555.1| 2023057 g107973 i0 97.143 0.265560165975104 35 0 14 1 58 91 2000 1966 Orpheovirus IHUMI-LCC2 genome assembly, complete genome: monopartite blastn 64 58.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Orpheoviridae Alphaorpheovirus Alphaorpheovirus massiliense
16227780 16227780 PRJNA944406_P_NODE_70173_length_250_cov_0.870056_g69214_i0 PRJNA944406 70173 250 0.870056 2.17514 Erythrocytic necrosis virus 1543320 Viruses Viruses 418 1.9399999999999998e-112   NTclustered gi|1624806635|gb|MK638688.1| 1543320 g69214 i0 96.8 4.036 250 8 100 0 1 250 70 319 Erythrocytic necrosis virus isolate SEQ_16 hypothetical protein mRNA, partial cds blastn 1009 418 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;