RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA944150" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA944150 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7301577 7301577 PRJNA944150_P_NODE_19986_length_199_cov_2.806667_g19735_i0 PRJNA944150 19986 199 2.806667 5.58526733 Synoicihabitans lomoniglobus 2909285 Bacteria Bacteria 126 1e-24   NTclustered gi|2452067159|gb|CP119075.1| 2909285 g19735 i0 88.462 1.60301507537688 104 12 52 0 1 104 1273807 1273704 Synoicihabitans lomoniglobus strain LMO-M01 chromosome, complete genome blastn 319 126 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Synoicihabitans Synoicihabitans lomoniglobus
9851580 9851580 PRJNA944150_P_NODE_23728_length_189_cov_1.228571_g23477_i0 PRJNA944150 23728 189 1.228571 2.32199919 Congregicoccus parvus 3081749 Bacteria Bacteria 322 1.12e-83   NTclustered gi|2599616993|dbj|AP028972.1| 3081749 g23477 i0 97.354 1 189 5 100 0 1 189 2913107 2913295 Opitutales bacterium ASA1 DNA, complete genome blastn 189 322 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Alterococcaceae Congregicoccus Congregicoccus parvus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;