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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA944150" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 10 ✖

tax_kingdom 1

bioproject 1

  • PRJNA944150 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2534924 2534924 PRJNA944150_P_NODE_5662_length_360_cov_3.392283_g5411_i0 PRJNA944150 5662 360 3.392283 12.2122188 Bacteria 2 Bacteria Bacteria 464 3.7e-126   NTclustered gi|2874253677|emb|OY969111.1| 171953 g5411 i0 91.57 93.2805555555556 344 18 94 9 1 338 714309 714647 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.3 genome assembly, chromosome: 1 blastn 33581 464 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
7301578 7301578 PRJNA944150_P_NODE_20026_length_199_cov_2.693333_g19775_i0 PRJNA944150 20026 199 2.693333 5.35973267 Thermoanaerobaculaceae bacterium 2699758 Bacteria Bacteria 87.9 4.73e-13   NTclustered gi|2874254005|emb|OY970330.1| 2699758 g19775 i0 82.178 16.5226130653266 101 18 51 0 1 101 7934038 7933938 MAG: Thermoanaerobaculaceae bacterium isolate MFD05537.bin.c.1 genome assembly, chromosome: 1 blastn 3288 87.9 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia Thermoanaerobaculales Thermoanaerobaculaceae   Thermoanaerobaculaceae bacterium
7301903 7301903 PRJNA944150_P_NODE_6846_length_328_cov_1.358423_g6595_i0 PRJNA944150 6846 328 1.358423 4.45562744 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 518 2.53e-142   NTclustered gi|2874254027|emb|OY970352.1| 171953 g6595 i0 95.122 324.551829268293 328 16 100 0 1 328 2367384 2367711 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.5 genome assembly, chromosome: 1 blastn 106453 518 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
7301918 7301918 PRJNA944150_P_NODE_8806_length_288_cov_5.016736_g8555_i0 PRJNA944150 8806 288 5.016736 14.44819968 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 387 6.43e-103   NTclustered gi|2874253760|emb|OY969701.1| 2283092 g8555 i0 90.972 312.125 288 24 99 2 3 288 3175788 3176075 MAG: Pyrinomonadaceae bacterium isolate MFD04212.bin.c.1 genome assembly, chromosome: 1 blastn 89892 387 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
12402852 12402852 PRJNA944150_P_NODE_33230_length_171_cov_1.860656_g32979_i0 PRJNA944150 33230 171 1.860656 3.18172176 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 174 2.93e-39   NTclustered gi|2874253692|emb|OY969418.1| 171953 g32979 i0 91.473 162.859649122807 129 8 74 3 20 146 4233670 4233797 MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 blastn 27849 174 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
14013167 14013167 PRJNA944150_P_NODE_44291_length_161_cov_2.098214_g44040_i0 PRJNA944150 44291 161 2.098214 3.37812454 Granulicella 940557 Bacteria Bacteria 292 7.24e-75   NTclustered gi|158148178|emb|AM887754.1| 474947 g44040 i0 99.379 100.136645962733 161 1 100 0 1 161 176 16 Acidobacteria bacterium AL partial 16S rRNA gene, strain AL blastn 16122 292 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteria bacterium AL
16561553 16561553 PRJNA944150_P_NODE_20493_length_198_cov_2.644295_g20242_i0 PRJNA944150 20493 198 2.644295 5.2357041 Bacteria 2 Bacteria Bacteria 220 4.45e-53   NTclustered gi|2874253677|emb|OY969111.1| 171953 g20242 i0 88.172 120.969696969697 186 20 93 2 14 198 715934 715750 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.3 genome assembly, chromosome: 1 blastn 23952 220 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
16561565 16561565 PRJNA944150_P_NODE_23273_length_190_cov_1.021277_g23022_i0 PRJNA944150 23273 190 1.021277 1.9404263 Bacteria 2 Bacteria Bacteria 87.9 4.47e-13   NTclustered gi|84452197|emb|AM180895.1| 903818 g23022 i0 88.732 100.868421052632 71 8 37 0 120 190 1495 1425 Holophaga foetida partial 23S rRNA gene, strain DSM 6591 blastn 19165 87.9 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Holophaga Holophaga foetida
17501771 17501771 PRJNA944150_P_NODE_26534_length_184_cov_1.244444_g26283_i0 PRJNA944150 26534 184 1.244444 2.28977696 Acidobacteriota bacterium 1978231 Bacteria Bacteria 80.5 7.2e-11   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g26283 i0 91.525 0.320652173913043 59 4 32 1 122 179 1586488 1586546 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 59 80.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
17836453 17836453 PRJNA944150_P_NODE_2054_length_582_cov_3.108818_g1833_i0 PRJNA944150 2054 582 3.108818 18.09332076 Bacteria 2 Bacteria Bacteria 601 4.549999999999999e-167   NTclustered gi|2874253677|emb|OY969111.1| 171953 g1833 i0 85.763 78.3092783505155 590 59 100 21 1 582 714990 714418 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.3 genome assembly, chromosome: 1 blastn 45576 601 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;