RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA944150" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA944150 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7301751 7301751 PRJNA944150_P_NODE_35506_length_167_cov_1.754237_g35255_i0 PRJNA944150 35506 167 1.754237 2.92957579 Halobellus limi 699433 Archaea Archaea 67.6 5e-7   NTclustered gi|1621075116|gb|CP031311.1| 699433 g35255 i0 84.507 0.425149700598802 71 8 41 2 8 76 564527 564596 Halobellus limi strain CGMCC 1.10331 chromosome, complete genome blastn 71 67.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobellus Halobellus limi
17501949 17501949 PRJNA944150_P_NODE_42994_length_162_cov_1.513274_g42743_i0 PRJNA944150 42994 162 1.513274 2.45150388 Natronomonas gomsonensis 1046043 Archaea Archaea 254 3.44e-63   NTclustered gi|2273673090|gb|CP101323.1| 1046043 g42743 i0 95.062 1.27777777777778 162 7 100 1 1 162 1203501 1203661 Natronomonas gomsonensis strain KCTC 4088 chromosome, complete genome blastn 207 254 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas gomsonensis
17836506 17836506 PRJNA944150_P_NODE_28874_length_179_cov_2.861538_g28623_i0 PRJNA944150 28874 179 2.861538 5.12215302 Halobacteriales 2235 Archaea Archaea 202 1.42e-47   NTclustered gi|1773374773|gb|CP044129.1| 2610902 g28623 i0 87.791 7.64804469273743 172 21 96 0 8 179 1028295 1028466 Halomicrobium sp. LC1Hm chromosome, complete genome blastn 1369 202 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halomicrobium Halomicrobium sp. LC1Hm
25149954 25149954 PRJNA944150_P_NODE_38920_length_165_cov_0.879310_g38669_i0 PRJNA944150 38920 165 0.87931 1.4508615 Haloglomus litoreum 3034026 Archaea Archaea 206 1e-48   NTclustered gi|2463606059|gb|CP119988.1| 3034026 g38669 i0 89.091 1 165 18 100 0 1 165 4479867 4479703 Haloglomus litoreum strain DT116 chromosome, complete genome blastn 165 206 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Haloglomus Haloglomus litoreum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;