RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA944150" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA944150 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13677445 13677445 PRJNA944150_P_NODE_43431_length_162_cov_0.902655_g43180_i0 PRJNA944150 43431 162 0.902655 1.4623011 uncultured Candidatus Saccharibacteria bacterium 179883 Bacteria Bacteria 148 1.6699999999999999e-31   NTclustered gi|2874253873|emb|OY969928.1| 179883 g43180 i0 85.034 20.3765432098765 147 20 90 2 1 146 892022 892167 MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD04212.bin.c.13 genome assembly, chromosome: 1 blastn 3301 148 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium
14951509 14951509 PRJNA944150_P_NODE_25672_length_185_cov_2.183824_g25421_i0 PRJNA944150 25672 185 2.183824 4.0400744 Candidatus Saccharibacteria bacterium oral taxon 488 713059 Bacteria Bacteria 324 3.03e-84   NTclustered gi|1842054184|gb|CP039999.1| 713059 g25421 i0 98.378 1 185 2 100 1 1 185 574890 575073 Candidatus Saccharibacteria bacterium oral taxon 488 strain CM001 chromosome, complete genome blastn 185 324 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
20050352 20050352 PRJNA944150_P_NODE_41036_length_164_cov_0.860870_g40785_i0 PRJNA944150 41036 164 0.86087 1.4118268 Candidatus Nanosynbacter featherlites 2572088 Bacteria Bacteria 91.6 2.9e-14   NTclustered gi|1663054866|gb|CP040004.1| 2572088 g40785 i0 96.429 0.341463414634146 56 1 34 1 109 164 302762 302708 Candidatus Nanosynbacter featherlites strain BB001 chromosome, complete genome blastn 56 91.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter featherlites
24210702 24210702 PRJNA944150_P_NODE_31399_length_174_cov_3.384000_g31148_i0 PRJNA944150 31399 174 3.384 5.88816 Pseudomonadati 3379134 Bacteria Bacteria 111 2.38e-20   NTclustered gi|2874254095|emb|OY970178.1| 2212470 g31148 i0 78.736 33.2758620689655 174 31 98 5 4 174 2128673 2128503 MAG: Candidatus Eisenbacteria bacterium isolate MFD05942.bin.c.1 genome assembly, chromosome: 1 blastn 5790 111 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;