RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA942359" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA942359 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8576078 8576078 PRJNA942359_P_NODE_7_length_3912_cov_70.755145_g4_i0 PRJNA942359 7 3912 70.755145 2767.9412724 Leviviridae sp. 2027243 Viruses Viruses 1074 0   NTclustered gi|2245486811|gb|ON162519.1| 2027243 g4 i0 84.573 0.601226993865031 1089 161 28 6 636 1722 1084 1 MAG: Leviviridae sp. isolate s42-k141_44103 RNA dependent RNA polymerase gene, partial cds blastn 2352 1074 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.
14950839 14950839 PRJNA942359_P_NODE_12_length_3462_cov_19.731779_g9_i0 PRJNA942359 12 3462 19.731779 683.11418898 Sholavirus sp. 'caenicola' 2846211 Viruses Viruses 1507 0   NTclustered gi|2497514791|ref|NC_074095.1| 2786397 g9 i0 76.053 2.40843443096476 3086 634 88 91 1 3031 3486 451 SsRNA phage SRR5466364_3 genomic sequence blastn 8338 1507 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae Sholavirus Sholavirus sp. 'caenicola'
14951056 14951056 PRJNA942359_P_NODE_592_length_966_cov_3.968645_g514_i0 PRJNA942359 592 966 3.968645 38.3371107 Leviviridae sp. 2027243 Viruses Viruses 405 6.52e-108   NTclustered gi|2245488938|gb|ON163587.1| 2027243 g514 i0 80.791 0.819875776397516 531 90 54 11 10 534 765 1289 MAG: Leviviridae sp. isolate 83-k141_204414 RNA dependent RNA polymerase gene, partial cds blastn 792 405 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;