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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA942359" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 10 ✖

tax_kingdom 1

bioproject 1

  • PRJNA942359 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2198479 2198479 PRJNA942359_P_NODE_8022_length_305_cov_12.556034_g7907_i0 PRJNA942359 8022 305 12.556034 38.2959037 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 326 1.52e-84   NTclustered gi|2621707050|emb|OY764903.1| 2212468 g7907 i0 85.993 264.950819672131 307 39 100 4 1 305 3559014 3559318 MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 blastn 80810 326 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
4751219 4751219 PRJNA942359_P_NODE_11284_length_268_cov_1.051282_g11169_i0 PRJNA942359 11284 268 1.051282 2.81743576 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 440 4.479999999999998e-119   NTclustered gi|2874253678|emb|OY969112.1| 171953 g11169 i0 96.617 344.182835820896 266 7 99 2 3 267 4731767 4732031 MAG: uncultured Acidobacteriota bacterium isolate MFD04212.bin.1.16 genome assembly, chromosome: 1 blastn 92241 440 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
7301051 7301051 PRJNA942359_P_NODE_16586_length_247_cov_1.724138_g16471_i0 PRJNA942359 16586 247 1.724138 4.25862086 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 353 5.46e-93   NTclustered gi|112980881|gb|DQ829685.1| 171953 g16471 i0 92.308 61.3724696356275 247 19 100 0 1 247 505 259 Uncultured Acidobacteria bacterium clone DON13 23S ribosomal RNA gene, partial sequence blastn 15159 353 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
8575734 8575734 PRJNA942359_P_NODE_10327_length_277_cov_2.441176_g10212_i0 PRJNA942359 10327 277 2.441176 6.76205752 Bryobacterales bacterium 2026791 Bacteria Bacteria 296 1.07e-75   NTclustered gi|2874254061|emb|OY970385.1| 2026791 g10212 i0 86.022 258.252707581227 279 35 100 4 1 277 2774352 2774628 MAG: Bryobacterales bacterium isolate MFD03726.bin.c.1 genome assembly, chromosome: 1 blastn 71536 296 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
16225864 16225864 PRJNA942359_P_NODE_15553_length_249_cov_0.886364_g15438_i0 PRJNA942359 15553 249 0.886364 2.20704636 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 416 6.939999999999999e-112   NTclustered gi|112980828|gb|DQ829632.1| 171953 g15438 i0 96.787 100.072289156627 249 8 100 0 1 249 315 67 Uncultured Acidobacteria bacterium clone DON17 16S ribosomal RNA gene, partial sequence blastn 24918 416 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
16561363 16561363 PRJNA942359_P_NODE_3433_length_430_cov_2.834734_g3318_i0 PRJNA942359 3433 430 2.834734 12.1893562 Bacteria 2 Bacteria Bacteria 717 0   NTclustered gi|2874254027|emb|OY970352.1| 171953 g3318 i0 96.744 139.325581395349 430 14 100 0 1 430 2365653 2366082 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.5 genome assembly, chromosome: 1 blastn 59910 717 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
18774762 18774762 PRJNA942359_P_NODE_19115_length_243_cov_2.870588_g19000_i0 PRJNA942359 19115 243 2.870588 6.97552884 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 322 1.51e-83   NTclustered gi|2874253796|emb|OY969780.1| 194844 g19000 i0 90.535 106.423868312757 243 23 100 0 1 243 285778 286020 MAG: uncultured Acidobacteriaceae bacterium isolate MFD09603.bin.c.4 genome assembly, chromosome: 1 blastn 25861 322 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
23875371 23875371 PRJNA942359_P_NODE_13279_length_253_cov_0.866667_g13164_i0 PRJNA942359 13279 253 0.866667 2.19266751 Acidobacteria bacterium Mor1 1660251 Bacteria Bacteria 322 1.58e-83   NTclustered gi|1037405666|gb|CP011806.1| 1660251 g13164 i0 89.683 94.8932806324111 252 26 99 0 1 252 97851 97600 Acidobacteria bacterium Mor1 chromosome blastn 24008 322 1 Bacteria Acidobacteriota subdivision 22 Pseudomonadati Acidobacteriota         Acidobacteria bacterium Mor1
23875637 23875637 PRJNA942359_P_NODE_7819_length_308_cov_4.600000_g7704_i0 PRJNA942359 7819 308 4.6 14.168 Acidobacteriota bacterium 1978231 Bacteria Bacteria 363 1.17e-95   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g7704 i0 89.547 272.886363636364 287 29 93 1 1 286 3298173 3298459 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 84049 363 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
25149182 25149182 PRJNA942359_P_NODE_17460_length_246_cov_0.901734_g17345_i0 PRJNA942359 17460 246 0.901734 2.21826564 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 287 5.599999999999999e-73   NTclustered gi|2874253744|emb|OY969603.1| 171953 g17345 i0 88.066 5.7479674796748 243 27 98 2 2 243 6561329 6561570 MAG: uncultured Acidobacteriota bacterium isolate MFD01476.bin.c.1 genome assembly, chromosome: 1 blastn 1414 287 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;