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contig_metadata

28 rows where analysis = "blastn", bioproject = "PRJNA942359" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 28 ✖

bioproject 1

  • PRJNA942359 · 28 ✖

analysis 1

  • blastn · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
922793 922793 PRJNA942359_P_NODE_10161_length_279_cov_1.398058_g10046_i0 PRJNA942359 10161 279 1.398058 3.90058182 Haslea sp. 197759 SAR_Eukaryotes SAR_Eukaryotes 128 4.15e-25   NTclustered gi|2722342554|gb|PP728232.1| 197759 g10046 i0 88.679 3.55913978494624 106 11 38 1 126 230 28387 28282 Haslea sp. strain P5 mitochondrion, complete genome blastn 993 128 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Haslea Haslea sp.
922932 922932 PRJNA942359_P_NODE_17201_length_247_cov_0.833333_g17086_i0 PRJNA942359 17201 247 0.833333 2.05833251 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 329 9.21e-86   NTclustered gi|820695469|tpe|LN714488.1| 572307 g17086 i0 91.02 28.5182186234818 245 20 100 2 3 247 300353 300595 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 7044 329 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
923104 923104 PRJNA942359_P_NODE_6901_length_324_cov_1.243028_g6786_i0 PRJNA942359 6901 324 1.243028 4.02741072 Witkowskia abiskoensis 1574455 SAR_Eukaryotes SAR_Eukaryotes 542 1.48e-149   NTclustered gi|725655293|gb|KJ011733.1| 1574455 g6786 i0 96.904 108.555555555556 323 10 99 0 2 324 475 153 Placoneis abiskoensis strain FD363 photosystem II reaction center protein D1 (psbA) gene, partial cds; chloroplast blastn 35172 542 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Cymbellales Witkowskiaceae Witkowskia Witkowskia abiskoensis
923156 923156 PRJNA942359_P_NODE_9341_length_287_cov_1.649533_g9226_i0 PRJNA942359 9341 287 1.649533 4.73415971 Uronema sp. WS-2012 1198319 SAR_Eukaryotes SAR_Eukaryotes 475 1.3299999999999996e-129   NTclustered gi|390988015|gb|JN885083.1| 1198319 g9226 i0 96.516 100.512195121951 287 10 100 0 1 287 380 94 Uronema sp. WS-2012 isolate PXM2010100401 small subunit ribosomal RNA gene, partial sequence blastn 28847 475 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Uronematidae Uronema Uronema sp. WS-2012
1258805 1258805 PRJNA942359_P_NODE_3341_length_435_cov_4.613260_g3226_i0 PRJNA942359 3341 435 4.61326 20.067681 Dinophyceae 2864 SAR_Eukaryotes SAR_Eukaryotes 191 8.53e-44   NTclustered gi|2862228891|gb|PQ645525.1| 89963 g3226 i0 95.041 28.4689655172414 121 6 37 0 28 148 3278 3398 Heterocapsa rotundata isolate AGSB0395 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12384 191 1 Eukaryota Sar     Dinophyceae Peridiniales Heterocapsaceae Heterocapsa Heterocapsa rotundata
2198256 2198256 PRJNA942359_P_NODE_15602_length_249_cov_0.886364_g15487_i0 PRJNA942359 15602 249 0.886364 2.20704636 Mayamaea permitis 1302819 SAR_Eukaryotes SAR_Eukaryotes 412 8.97e-111   NTclustered gi|2163362270|dbj|LC648446.1| 1302819 g15487 i0 96.774 99.6987951807229 248 7 99 1 2 249 1099 853 Mayamaea permitis NIES-2724 chloroplast gene for ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial cds blastn 24825 412 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Mayamaea Mayamaea permitis
3473819 3473819 PRJNA942359_P_NODE_20223_length_242_cov_0.923077_g20108_i0 PRJNA942359 20223 242 0.923077 2.23384634 Halamphora sp. 1951536 SAR_Eukaryotes SAR_Eukaryotes 353 5.34e-93   NTclustered gi|2749492174|gb|PP727123.1| 1951536 g20108 i0 93.305 11.1446280991736 239 16 99 0 1 239 84769 85007 Halamphora sp. strain SZCZEY 2167 chloroplast, complete genome blastn 2697 353 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Amphipleuraceae Halamphora Halamphora sp.
4751268 4751268 PRJNA942359_P_NODE_13524_length_252_cov_1.206704_g13409_i0 PRJNA942359 13524 252 1.206704 3.04089408 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 455 1.49e-123   NTclustered gi|820695469|tpe|LN714488.1| 572307 g13409 i0 99.206 25.5753968253968 252 2 100 0 1 252 300053 300304 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 6445 455 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
4751416 4751416 PRJNA942359_P_NODE_20484_length_235_cov_2.888889_g20369_i0 PRJNA942359 20484 235 2.888889 6.78888915 Halamphora calidilacuna 2133758 SAR_Eukaryotes SAR_Eukaryotes 182 2.57e-41   NTclustered gi|1372147719|gb|MF997424.1| 2133758 g20369 i0 81.197 1.68936170212766 234 37 98 7 2 231 59801 59571 Halamphora calidilacuna mitochondrion, complete genome blastn 397 182 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Amphipleuraceae Halamphora Halamphora calidilacuna
8576038 8576038 PRJNA942359_P_NODE_6147_length_339_cov_1.823308_g6032_i0 PRJNA942359 6147 339 1.823308 6.18101412 Heterococcus caespitosus 55585 SAR_Eukaryotes SAR_Eukaryotes 599 9.119999999999999e-167   NTclustered gi|157411020|gb|EF990191.1| 55585 g6032 i0 98.525 98.7669616519174 339 5 100 0 1 339 1492 1830 Heterococcus caespitosus large subunit ribosomal RNA gene, partial sequence blastn 33482 599 1 Eukaryota Sar     Xanthophyceae Tribonematales Heteropediaceae Heterococcus Heterococcus caespitosus
8576114 8576114 PRJNA942359_P_NODE_9927_length_281_cov_1.500000_g9812_i0 PRJNA942359 9927 281 1.5 4.215 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 339 1.78e-88   NTclustered gi|820695469|tpe|LN714488.1| 572307 g9812 i0 90.038 11.2989323843416 261 26 100 0 1 261 157575 157315 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 3175 339 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
8911676 8911676 PRJNA942359_P_NODE_2287_length_518_cov_1.516854_g2173_i0 PRJNA942359 2287 518 1.516854 7.85730372 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 654 0   NTclustered gi|325156266|gb|JF304163.1| 5886 g2173 i0 98.138 72.5791505791506 376 6 72 1 144 518 882 507 Paramecium primaurelia strain 90 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence; macronuclear blastn 37596 654 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
9851035 9851035 PRJNA942359_P_NODE_20728_length_224_cov_6.192053_g20613_i0 PRJNA942359 20728 224 6.192053 13.87019872 Stramenopiles sp. MAST-8B-sp1 2805730 SAR_Eukaryotes SAR_Eukaryotes 76.8 1.18e-9   NTclustered gi|1960721543|gb|MW521836.1| 2805730 g20613 i0 77.083 29.2410714285714 144 25 64 2 33 176 4120 4255 Stramenopiles sp. MAST-8B-sp1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6550 76.8 1 Eukaryota Sar             Stramenopiles sp. MAST-8B-sp1
11126758 11126758 PRJNA942359_P_NODE_769_length_866_cov_1.388398_g676_i0 PRJNA942359 769 866 1.388398 12.02352668 Halamphora sp. 1951536 SAR_Eukaryotes SAR_Eukaryotes 953 0   NTclustered gi|2751573237|gb|PP962257.1| 1951536 g676 i0 87.681 97.5958429561201 828 90 95 9 41 866 30408 31225 Halamphora sp. strain SZCZEY 2167 mitochondrion, complete genome blastn 84518 953 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Amphipleuraceae Halamphora Halamphora sp.
12402229 12402229 PRJNA942359_P_NODE_5390_length_358_cov_1.077193_g5275_i0 PRJNA942359 5390 358 1.077193 3.85635094 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 499 1.01e-136   NTclustered gi|820695469|tpe|LN714488.1| 572307 g5275 i0 92.113 45.3854748603352 355 27 99 1 3 357 300715 300362 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 16248 499 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
13676835 13676835 PRJNA942359_P_NODE_7691_length_310_cov_3.582278_g7576_i0 PRJNA942359 7691 310 3.582278 11.1050618 Philasterides dicentrarchi 282688 SAR_Eukaryotes SAR_Eukaryotes 302 2.6e-77   NTclustered gi|49616744|gb|AY643504.1| 282688 g7576 i0 86.525 59.8741935483871 282 28 89 9 1 277 277 1 Philasterides dicentrarchi 26S ribosomal RNA gene, partial sequence blastn 18561 302 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Philasteridae Philasterides Philasterides dicentrarchi
14951127 14951127 PRJNA942359_P_NODE_9752_length_283_cov_1.485714_g9637_i0 PRJNA942359 9752 283 1.485714 4.20457062 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 154 6.96e-33   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g9637 i0 85.43 53.1024734982332 151 19 53 3 1 150 2938 2790 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 15028 154 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
17501246 17501246 PRJNA942359_P_NODE_3394_length_433_cov_1.094444_g3279_i0 PRJNA942359 3394 433 1.094444 4.73894252 Cercomonas sp. 1979794 SAR_Eukaryotes SAR_Eukaryotes 470 9.74e-128   NTclustered gi|2651357797|gb|PP174310.1| 1979794 g3279 i0 86.374 99.5011547344111 433 55 99 4 5 433 3893 3461 Cercomonas sp. isolate 1-1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 43084 470 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp.
17501313 17501313 PRJNA942359_P_NODE_7434_length_314_cov_2.103734_g7319_i0 PRJNA942359 7434 314 2.103734 6.60572476 Tryblionella apiculata 1003145 SAR_Eukaryotes SAR_Eukaryotes 274 5.759999999999998e-69   NTclustered gi|2088232767|ref|NC_056792.1| 1003145 g7319 i0 82.769 2.29299363057325 325 39 100 14 1 314 37026 37344 Tryblionella apiculata isolate SZCZR1825 mitochondrion, complete genome blastn 720 274 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Tryblionella Tryblionella apiculata
17501335 17501335 PRJNA942359_P_NODE_8374_length_300_cov_0.894273_g8259_i0 PRJNA942359 8374 300 0.894273 2.682819 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 366 8.77e-97   NTclustered gi|820695469|tpe|LN714488.1| 572307 g8259 i0 88.667 27.3233333333333 300 34 100 0 1 300 116165 116464 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 8197 366 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
18774667 18774667 PRJNA942359_P_NODE_1475_length_638_cov_2.122124_g1365_i0 PRJNA942359 1475 638 2.122124 13.53915112 Philasterida sp. 2006707 SAR_Eukaryotes SAR_Eukaryotes 832 0   NTclustered gi|2354193480|gb|OP896969.1| 2006707 g1365 i0 96.429 68.9404388714733 504 18 85 0 135 638 1264 761 Philasterida sp. strain tDaCF9_52 large subunit ribosomal RNA gene, partial sequence blastn 43984 832 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida     Philasterida sp.
18774871 18774871 PRJNA942359_P_NODE_6035_length_342_cov_2.877323_g5920_i0 PRJNA942359 6035 342 2.877323 9.84044466 Halamphora montana 97221 SAR_Eukaryotes SAR_Eukaryotes 627 4.22e-175   NTclustered gi|1143637947|gb|KX120341.1| 1951535 g5920 i0 99.708 100.111111111111 343 0 100 1 1 342 358 16 Halamphora montana isolate L1327 28S ribosomal RNA gene, partial sequence blastn 34238 627 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Amphipleuraceae Halamphora Halamphora montana
18774916 18774916 PRJNA942359_P_NODE_8415_length_299_cov_1.066372_g8300_i0 PRJNA942359 8415 299 1.066372 3.18845228 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 481 2.99e-131   NTclustered gi|820695469|tpe|LN714488.1| 572307 g8300 i0 95.652 4.89966555183946 299 13 100 0 1 299 117510 117808 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 1465 481 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
19110145 19110145 PRJNA942359_P_NODE_11195_length_268_cov_2.543590_g11080_i0 PRJNA942359 11195 268 2.54359 6.8168212 Bacillariophyceae 33849 SAR_Eukaryotes SAR_Eukaryotes 422 1.62e-113   NTclustered gi|2328365172|ref|NC_067848.1| 97227 g11080 i0 95.167 194.75 269 9 100 4 1 268 70832 70567 Gomphonema parvulum voucher personal collection:A.Bruce Cahoon:diatom-2021-A chloroplast, complete genome blastn 52193 425 0.992941176470588 Eukaryota Sar   Bacillariophyta Bacillariophyceae Cymbellales Gomphonemataceae Gomphonema Gomphonema parvulum
20049799 20049799 PRJNA942359_P_NODE_9996_length_281_cov_0.769231_g9881_i0 PRJNA942359 9996 281 0.769231 2.16153911 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 431 2.85e-116   NTclustered gi|820695469|tpe|LN714488.1| 572307 g9881 i0 94.604 45.8078291814947 278 15 100 0 1 278 299905 299628 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 12872 431 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
21324893 21324893 PRJNA942359_P_NODE_1017_length_761_cov_6.405523_g914_i0 PRJNA942359 1017 761 6.405523 48.74603003 Naviculales sp. 2126271 SAR_Eukaryotes SAR_Eukaryotes 1064 0   NTclustered gi|2620230846|gb|OR797295.1| 2126271 g914 i0 91.995 96.2785808147175 762 56 100 4 1 761 4072 4829 Naviculales sp. strain SZCZO2114 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 73268 1064 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales     Naviculales sp.
25149235 25149235 PRJNA942359_P_NODE_1960_length_557_cov_2.832645_g1846_i0 PRJNA942359 1960 557 2.832645 15.77783265 Halamphora calidilacuna 2133758 SAR_Eukaryotes SAR_Eukaryotes 723 0   NTclustered gi|1372147719|gb|MF997424.1| 2133758 g1846 i0 90.27 72.7253141831239 555 50 99 4 5 557 63238 62686 Halamphora calidilacuna mitochondrion, complete genome blastn 40508 723 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Amphipleuraceae Halamphora Halamphora calidilacuna
25149295 25149295 PRJNA942359_P_NODE_4120_length_399_cov_2.180982_g4005_i0 PRJNA942359 4120 399 2.180982 8.70211818 Halamphora sp. 1951536 SAR_Eukaryotes SAR_Eukaryotes 370 9.29e-98   NTclustered gi|2751573237|gb|PP962257.1| 1951536 g4005 i0 86.167 49.6967418546366 347 42 86 6 4 346 29694 29350 Halamphora sp. strain SZCZEY 2167 mitochondrion, complete genome blastn 19829 370 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Amphipleuraceae Halamphora Halamphora sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;