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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA942359" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 11 ✖

bioproject 1

  • PRJNA942359 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2534462 2534462 PRJNA942359_P_NODE_10322_length_277_cov_3.867647_g10207_i0 PRJNA942359 10322 277 3.867647 10.71338219 Neobodo 312470 Euglenozoa other_Eukaryota 436 6.019999999999999e-118   NTclustered gi|68271531|gb|DQ086712.1| 333514 g10207 i0 95.29 152.895306859206 276 11 99 2 4 277 635 360 Neobodo cf. designis isolate B_DESICF large subunit ribosomal RNA gene, partial sequence blastn 42352 436 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo cf. designis
3473856 3473856 PRJNA942359_P_NODE_3643_length_419_cov_3.286127_g3528_i0 PRJNA942359 3643 419 3.286127 13.76887213 Leishmania amazonensis 5659 Euglenozoa other_Eukaryota 324 7.74e-84   NTclustered gi|440222381|gb|JX030049.1| 5659 g3528 i0 81.279 88.8639618138425 438 49 100 28 1 419 439 16 Leishmania amazonensis isolate LaPH8.rRNA.25 28S ribosomal RNA (LSU-beta), partial sequence blastn 37234 324 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
4751433 4751433 PRJNA942359_P_NODE_2424_length_504_cov_3.909513_g2310_i0 PRJNA942359 2424 504 3.909513 19.70394552 Rhynchomonas nasuta 127150 Euglenozoa other_Eukaryota 915 0   NTclustered gi|77994657|gb|DQ207595.1| 127150 g2310 i0 99.601 99.8253968253968 501 2 99 0 1 501 1530 2030 Rhynchomonas nasuta strain HFCC17 18S ribosomal RNA gene, partial sequence blastn 50312 915 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
6026074 6026074 PRJNA942359_P_NODE_1485_length_635_cov_10.599644_g1375_i0 PRJNA942359 1485 635 10.599644 67.3077394 Vahlkampfia avara 74082 Heterolobosea other_Eukaryota 1173 0   NTclustered gi|2874368078|gb|PQ819802.1| 74082 g1375 i0 100 47.2015748031496 635 0 100 0 1 635 1357 1991 Vahlkampfia avara strain CCAP 1588/1A small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 29973 1173 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
8575999 8575999 PRJNA942359_P_NODE_4547_length_383_cov_14.070968_g4432_i0 PRJNA942359 4547 383 14.070968 53.89180744 Crithidia fasciculata 5656 Euglenozoa other_Eukaryota 233 1.22e-56   NTclustered gi|2414483|emb|Y00055.1| 5656 g4432 i0 88.776 68.6971279373368 196 15 68 7 1 192 7064 7256 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 26311 233 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
9851158 9851158 PRJNA942359_P_NODE_7788_length_309_cov_1.300847_g7673_i0 PRJNA942359 7788 309 1.300847 4.01961723 Neobodo borokensis 1729212 Euglenozoa other_Eukaryota 566 8.33e-157   NTclustered gi|930722314|gb|KT223311.1| 1729212 g7673 i0 99.676 100.582524271845 309 1 100 0 1 309 383 75 Neobodo borokensis strain B-74 18S ribosomal RNA gene, partial sequence blastn 31080 566 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo borokensis
9851192 9851192 PRJNA942359_P_NODE_948_length_784_cov_7.803094_g846_i0 PRJNA942359 948 784 7.803094 61.17625696 Rhynchomonas nasuta 127150 Euglenozoa other_Eukaryota 1221 0   NTclustered gi|41400287|gb|AY425023.1| 127150 g846 i0 94.904 82.9987244897959 785 33 100 5 1 784 654 1432 Rhynchomonas nasuta strain ATCC 50105 18S ribosomal RNA gene, partial sequence blastn 65071 1221 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
11126780 11126780 PRJNA942359_P_NODE_8649_length_295_cov_1.234234_g8534_i0 PRJNA942359 8649 295 1.234234 3.6409903 Naegleria sp. 37103 Heterolobosea other_Eukaryota 468 2.29e-127   NTclustered gi|2651357798|gb|PP174311.1| 37103 g8534 i0 95.254 14.0237288135593 295 14 100 0 1 295 3075 3369 Naegleria sp. isolate 33 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 4137 468 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria sp.
16225821 16225821 PRJNA942359_P_NODE_133_length_1691_cov_13.425216_g107_i0 PRJNA942359 133 1691 13.425216 227.02040256 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 989 0   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g107 i0 84.956 33.0881135422827 1017 108 73 32 1 1003 2599 3584 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 55952 989 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
23875554 23875554 PRJNA942359_P_NODE_299_length_1291_cov_14.642857_g249_i0 PRJNA942359 299 1291 14.642857 189.03928387 Vahlkampfia avara 74082 Heterolobosea other_Eukaryota 2385 0   NTclustered gi|399764212|gb|JQ271723.1| 74082 g249 i0 100 48.7885360185902 1291 0 100 0 1 1291 31 1321 Vahlkampfia avara strain 4171L 18S ribosomal RNA gene, partial sequence blastn 62986 2385 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
24210445 24210445 PRJNA942359_P_NODE_4779_length_376_cov_1.521452_g4664_i0 PRJNA942359 4779 376 1.521452 5.72065952 Kinetoplastea 5653 Euglenozoa other_Eukaryota 673 0   NTclustered gi|59891971|gb|AY753631.1| 266821 g4664 i0 99.196 100.321808510638 373 3 99 0 4 376 1240 868 Bodonidae sp. river Thames 18S ribosomal RNA gene, partial sequence blastn 37721 678 0.992625368731563 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae   Bodonidae sp. river Thames

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;