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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA942359" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 7 ✖

bioproject 1

  • PRJNA942359 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6026008 6026008 PRJNA942359_P_NODE_11425_length_266_cov_2.528497_g11310_i0 PRJNA942359 11425 266 2.528497 6.72580202 Vexillifera fluvialis 1105343 Discosea other_Eukaryota 425 1.24e-114   NTclustered gi|354720323|gb|HQ687482.1| 1105343 g11310 i0 95.506 3.03007518796993 267 11 100 1 1 266 301 35 Vexillifera fluvialis strain RR1 small subunit ribosomal RNA gene, partial sequence blastn 806 425 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera fluvialis
14951066 14951066 PRJNA942359_P_NODE_6292_length_336_cov_1.292776_g6177_i0 PRJNA942359 6292 336 1.292776 4.34372736 Phalansterium filosum 857046 Evosea other_Eukaryota 185 2.9999999999999996e-42   NTclustered gi|300078501|gb|GU001163.1| 857046 g6177 i0 78.378 99.6964285714286 296 56 87 7 2 292 2843 2551 Phalansterium sp. EEG-2010/THA 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 33498 185 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium filosum
17501266 17501266 PRJNA942359_P_NODE_4714_length_378_cov_1.711475_g4599_i0 PRJNA942359 4714 378 1.711475 6.4693755 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 616 1.0199999999999997e-171   NTclustered gi|1812585648|gb|MT109102.1| 590481 g4599 i0 96.032 73.6428571428571 378 15 100 0 1 378 39 416 Uncultured Amoebozoa isolate PC:01/16 P437_Un small subunit ribosomal RNA gene, partial sequence blastn 27837 616 1 Eukaryota Amoebozoa             uncultured Amoebozoa
18774713 18774713 PRJNA942359_P_NODE_16855_length_247_cov_0.896552_g16740_i0 PRJNA942359 16855 247 0.896552 2.21448344 Entamoeba suis 359305 Evosea other_Eukaryota 457 4.05e-124   NTclustered gi|2724186440|gb|PP735752.1| 359305 g16740 i0 100 88.7570850202429 247 0 100 0 1 247 383 137 Entamoeba suis isolate S009 small subunit ribosomal RNA gene, partial sequence blastn 21923 457 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba suis
20049469 20049469 PRJNA942359_P_NODE_11736_length_263_cov_2.221053_g11621_i0 PRJNA942359 11736 263 2.221053 5.84136939 Didymium azorellae 2059306 Evosea other_Eukaryota 285 2.1699999999999997e-72   NTclustered gi|2329703668|gb|MW240316.1| 2059306 g11621 i0 86.364 99.9125475285171 264 33 100 3 1 263 93 354 Didymium azorellae strain MA-Fungi 91159 small subunit ribosomal RNA gene, partial sequence blastn 26277 285 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium azorellae
20049708 20049708 PRJNA942359_P_NODE_4936_length_371_cov_1.677852_g4821_i0 PRJNA942359 4936 371 1.677852 6.22483092 Squamamoeba japonica 1167875 Evosea other_Eukaryota 161 5.619999999999998e-35   NTclustered gi|381423465|gb|JN638030.1| 1167875 g4821 i0 76.218 26.9407008086253 349 58 89 17 43 371 1636 1979 Squamamoeba japonica strain CCAP 1593/1 clone 2218 18S ribosomal RNA gene, partial sequence blastn 9995 161 1 Eukaryota Amoebozoa   Evosea       Squamamoeba Squamamoeba japonica
24210372 24210372 PRJNA942359_P_NODE_11679_length_264_cov_1.376963_g11564_i0 PRJNA942359 11679 264 1.376963 3.63518232 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 479 9.33e-131   NTclustered gi|399764278|gb|JQ271789.1| 1215998 g11564 i0 99.618 14.875 262 1 99 0 1 262 504 243 Tubulinea group 04 sp. P18 18S ribosomal RNA gene, partial sequence blastn 3927 479 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 04 sp. P18

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;